RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 C18orf8Q96DM3 657 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 APIPQ96GX9 242 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 PPP1R13BQ96KQ4 1090 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 CAMK1GQ96NX5 476 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 SELENOOQ9BVL4 669 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 SCNM1Q9BWG6 230 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 THAP2Q9H0W7 228 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 TBC1D17Q9HA65 648 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 DMAP1Q9NPF5 467 aaPredicted RBP5.58□□□□□ -1.52
C9orf3-205ENST00000427193 CNGB3Q9NQW8 809 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 VPS45Q9NRW7 570 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 MRPL17Q9NRX2 175 aaKnown RBP5.58□□□□□ -1.52
C9orf3-205ENST00000427193 ASNSD1Q9NWL6 643 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 COMMD8Q9NX08 183 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 ADAM22Q9P0K1 906 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 IGSF9Q9P2J2 1179 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 TRIM10Q9UDY6 481 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 GMEB2Q9UKD1 530 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 ITGB1BP2Q9UKP3 347 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 TFR2Q9UP52 801 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.58□□□□□ -1.52
C9orf3-205ENST00000427193 PTPN13Q12923 2485 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 ACACAQ13085 2346 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 DENND4AQ7Z401 1863 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 HECTD1Q9ULT8 2610 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 MIA3Q5JRA6 1907 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 M0QYV0 167 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 ZSCAN12O43309 604 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 CXCL14O95715 111 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 OLFM2O95897 454 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 MBPP02686 304 aaPredicted RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 CALB1P05937 261 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 PTMAP06454 111 aaKnown RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 FGF2P09038 288 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 TMIGD3P0DMS9 266 aaPredicted RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 MYF5P13349 255 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 ADORA2BP29275 332 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 HOXA9P31269 272 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 HTR7P34969 479 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 RFC1P35251 1148 aaPredicted RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 MAGEA9P43362 315 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 ACADSBP45954 432 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 NSFP46459 744 aaKnown RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 CARSP49589 748 aaKnown RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 MAP3K7CLP57077 242 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 DAOAP59103 153 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 RPL7AP62424 266 aaKnown RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 OGDHQ02218 1023 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 SMC1AQ14683 1233 aaKnown RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 SPA17Q15506 151 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 TAF5Q15542 800 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 C2CD6Q53TS8 623 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 UBAP2Q5T6F2 1119 aaKnown RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 MMS22LQ6ZRQ5 1243 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 CYP4V2Q6ZWL3 525 aaPredicted RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 ERICH1Q86X53 443 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 CEP57Q86XR8 500 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 TMC8Q8IU68 726 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 P3H2Q8IVL5 708 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 FSTL5Q8N475 847 aaPredicted RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 CMASQ8NFW8 434 aaPredicted RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 MBD3L2Q8NHZ7 208 aaPredicted RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 SCAMP5Q8TAC9 235 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 ZNF707Q96C28 371 aaPredicted RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 PGAP3Q96FM1 320 aaPredicted RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 C11orf70Q9BRQ4 267 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 DDX23Q9BUQ8 820 aaKnown RBP5.57□□□□□ -1.52
C9orf3-205ENST00000427193 TRIM7Q9C029 511 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 DNAI2Q9GZS0 605 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 WDR35Q9P2L0 1181 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 UVRAGQ9P2Y5 699 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 MYO1AQ9UBC5 1043 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 SCML2Q9UQR0 700 aa5.57□□□□□ -1.52
C9orf3-205ENST00000427193 AKAP13Q12802 2813 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 PATJQ8NI35 1801 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 GOLGA6L9A6NEM1 432 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 YJEFN3A6XGL0 299 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 E7ENQ6 273 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 TLX3O43711 291 aaPredicted RBP5.56□□□□□ -1.52
C9orf3-205ENST00000427193 WDR47O94967 919 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 ZBED1O96006 694 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 MAN1A1P33908 653 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 PTPN9P43378 593 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 TUFMP49411 452 aaKnown RBP5.56□□□□□ -1.52
C9orf3-205ENST00000427193 RGS7P49802 495 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 PEX5P50542 639 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 TKTL1P51854 596 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 KIF5AQ12840 1032 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 SPOUT1Q5T280 376 aaKnown RBP5.56□□□□□ -1.52
C9orf3-205ENST00000427193 RNF220Q5VTB9 566 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 GRHL2Q6ISB3 625 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 C11orf63Q6NUN7 778 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 MSANTD2Q6P1R3 559 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 DENND5BQ6ZUT9 1274 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 FAM183BPQ6ZVS7 135 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 SPATA2LQ8IUW3 424 aaPredicted RBP5.56□□□□□ -1.52
C9orf3-205ENST00000427193 NUP93Q8N1F7 819 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 C17orf53Q8N3J3 647 aaPredicted RBP5.56□□□□□ -1.52
C9orf3-205ENST00000427193 SDR16C5Q8N3Y7 309 aa5.56□□□□□ -1.52
C9orf3-205ENST00000427193 JOSD2Q8TAC2 188 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms