RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 MFSD3Q96ES6 412 aa17.97■□□□□ 0.47
MSH5-207ENST00000425703 TCF12Q99081 682 aa17.97■□□□□ 0.47
MSH5-207ENST00000425703 TRIT1Q9H3H1 467 aaKnown RBP17.97■□□□□ 0.47
MSH5-207ENST00000425703 SRMSQ9H3Y6 488 aa17.97■□□□□ 0.47
MSH5-207ENST00000425703 APMAPQ9HDC9 416 aa17.97■□□□□ 0.47
MSH5-207ENST00000425703 IGHV5-51A0A0C4DH38 117 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 FAM237BA0A1B0GVD1 139 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 UBA6A0AVT1 1052 aaPredicted RBP17.96■□□□□ 0.47
MSH5-207ENST00000425703 SDR42E2A6NKP2 422 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 ERVH48-1M5A8F1 160 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 PFDN6O15212 129 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 AVILO75366 819 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 TMEM63AO94886 807 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 VAPBO95292 243 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 FGF5P12034 268 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 PAMP19021 973 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 MAP4P27816 1152 aaKnown RBP17.96■□□□□ 0.47
MSH5-207ENST00000425703 MAGEA3P43357 314 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 GNG11P61952 73 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 PPP1CAP62136 330 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 FOXM1Q08050 763 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 MAP7Q14244 749 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 SOWAHCQ53LP3 525 aaPredicted RBP17.96■□□□□ 0.47
MSH5-207ENST00000425703 RNF187Q5TA31 235 aaPredicted RBP17.96■□□□□ 0.47
MSH5-207ENST00000425703 SDCCAG8Q86SQ7 713 aaPredicted RBP17.96■□□□□ 0.47
MSH5-207ENST00000425703 TBC1D21Q8IYX1 336 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 OR4E2Q8NGC2 313 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 OR52E1Q8NGJ3 308 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 WBP1Q96G27 269 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 MAP3K3Q99759 626 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 CTRCQ99895 268 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 P2RY12Q9H244 342 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 SAMD15Q9P1V8 674 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 PCYOX1Q9UHG3 505 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 POLG2Q9UHN1 485 aa17.96■□□□□ 0.47
MSH5-207ENST00000425703 BHMG1C9JSJ3 638 aaPredicted RBP17.95■□□□□ 0.46
MSH5-207ENST00000425703 TK2O00142 265 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 RAD1O60671 282 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 GPC4O75487 556 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 NDUFS3O75489 264 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 STK17BO94768 372 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 ZBTB11O95625 1053 aaPredicted RBP17.95■□□□□ 0.46
MSH5-207ENST00000425703 CCR7P32248 378 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 ARCN1P48444 511 aaKnown RBP17.95■□□□□ 0.46
MSH5-207ENST00000425703 ADARP55265 1226 aaKnown RBP17.95■□□□□ 0.46
MSH5-207ENST00000425703 SH3BP2P78314 561 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 HSD11B2P80365 405 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 TYSND1Q2T9J0 566 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.95■□□□□ 0.46
MSH5-207ENST00000425703 PPIL6Q8IXY8 311 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 SLC22A15Q8IZD6 547 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 CACNA2D3Q8IZS8 1091 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 NLGN4XQ8N0W4 816 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 D2HGDHQ8N465 521 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 NAT8LQ8N9F0 302 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 SIDT2Q8NBJ9 832 aaKnown RBP17.95■□□□□ 0.46
MSH5-207ENST00000425703 PHC3Q8NDX5 983 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 NLGN4YQ8NFZ3 816 aaPredicted RBP17.95■□□□□ 0.46
MSH5-207ENST00000425703 OR5K2Q8NHB8 316 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 SERPINB12Q96P63 405 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 FCRL4Q96PJ5 515 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 PANX3Q96QZ0 392 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 OR6C1Q96RD1 312 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 PDE7BQ9NP56 450 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 GNPTGQ9UJJ9 305 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 POMT2Q9UKY4 750 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 ASF1AQ9Y294 204 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 LOC400499M0QZD8 3231 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 MGAQ8IWI9 3026 aa17.95■□□□□ 0.46
MSH5-207ENST00000425703 KPNA5O15131 536 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 ATXN7O15265 892 aaPredicted RBP17.94■□□□□ 0.46
MSH5-207ENST00000425703 KDM1AO60341 852 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 DLGAP3O95886 979 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 APOA4P06727 396 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 KPNA2P52292 529 aaKnown RBP17.94■□□□□ 0.46
MSH5-207ENST00000425703 TERF1P54274 439 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 ACY1Q03154 408 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 PPP1R7Q15435 360 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 KCTD19Q17RG1 926 aaPredicted RBP17.94■□□□□ 0.46
MSH5-207ENST00000425703 DNAJC21Q5F1R6 531 aaKnown RBP17.94■□□□□ 0.46
MSH5-207ENST00000425703 CASC4Q6P4E1 433 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 LDB1Q86U70 411 aaPredicted RBP17.94■□□□□ 0.46
MSH5-207ENST00000425703 TMEM135Q86UB9 458 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 AMIGO1Q86WK6 493 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 ESX1Q8N693 406 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 IL22RA1Q8N6P7 574 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 ZSCAN1Q8NBB4 408 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 RUNDC3BQ96NL0 473 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 NAPGQ99747 312 aaPredicted RBP17.94■□□□□ 0.46
MSH5-207ENST00000425703 C1GALT1Q9NS00 363 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 PYCARDQ9ULZ3 195 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 CDYLQ9Y232 598 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 BTRCQ9Y297 605 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 VPS9D1Q9Y2B5 631 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 SAR1BQ9Y6B6 198 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 SDK2Q58EX2 2172 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 PIKFYVEQ9Y2I7 2098 aa17.94■□□□□ 0.46
MSH5-207ENST00000425703 CTAGE9A4FU28 777 aa17.93■□□□□ 0.46
MSH5-207ENST00000425703 SLCO2B1O94956 709 aa17.93■□□□□ 0.46
MSH5-207ENST00000425703 RPN2P04844 631 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms