RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 NCLNQ969V3 563 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 P2RY13Q9BPV8 354 aa11.7□□□□□ -0.54
PTPRN-204ENST00000423636 RIOK2Q9BVS4 552 aaKnown RBP11.7□□□□□ -0.54
PTPRN-204ENST00000423636 PLXNA4Q9HCM2 1894 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 OTOL1A6NHN0 477 aaPredicted RBP11.69□□□□□ -0.54
PTPRN-204ENST00000423636 H3BSA7 217 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 K7ESM1 405 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 RHOP08100 348 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 NR4A1P22736 598 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 PDHA2P29803 388 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 ZFP36L2P47974 494 aaKnown RBP11.69□□□□□ -0.54
PTPRN-204ENST00000423636 GSSP48637 474 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 NADK2Q4G0N4 442 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 C22orf39Q6P5X5 142 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 C12orf40Q86WS4 652 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 ZNF483Q8TF39 744 aaPredicted RBP11.69□□□□□ -0.54
PTPRN-204ENST00000423636 ELMO1Q92556 727 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 HHIPL1Q96JK4 782 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 APOLD1Q96LR9 279 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 MYOCQ99972 504 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 INPP5KQ9BT40 448 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 FAM126AQ9BYI3 521 aaPredicted RBP11.69□□□□□ -0.54
PTPRN-204ENST00000423636 KIAA1522Q9P206 1035 aaPredicted RBP11.69□□□□□ -0.54
PTPRN-204ENST00000423636 RAD51BO15315 384 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 ABCB1P08183 1280 aaPredicted RBP11.69□□□□□ -0.54
PTPRN-204ENST00000423636 AQP1P29972 269 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 SPAM1P38567 509 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 CTSCP53634 463 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 PIGFQ07326 219 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 TRAF3Q13114 568 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 PTCHD3Q3KNS1 767 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 ENPP6Q6UWR7 440 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 SNX20Q7Z614 316 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 EPHX4Q8IUS5 362 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 RBFAQ8N0V3 343 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 NXPE1Q8N323 547 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 OR2T34Q8NGX1 318 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 OR2T3Q8NH03 318 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 SGCDQ92629 289 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 TMEM125Q96AQ2 219 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 ZNF689Q96CS4 500 aaPredicted RBP11.69□□□□□ -0.54
PTPRN-204ENST00000423636 COPS8Q99627 209 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 CARS2Q9HA77 564 aaKnown RBP11.69□□□□□ -0.54
PTPRN-204ENST00000423636 MAGEE1Q9HCI5 957 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 PAPOLBQ9NRJ5 636 aaKnown RBP11.69□□□□□ -0.54
PTPRN-204ENST00000423636 C6orf203Q9P0P8 240 aaPredicted RBP11.69□□□□□ -0.54
PTPRN-204ENST00000423636 CELSR3Q9NYQ7 3312 aa11.69□□□□□ -0.54
PTPRN-204ENST00000423636 PFDN6O15212 129 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 ULK1O75385 1050 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 CLPTM1O96005 669 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 FGF4P08620 206 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 IDO1P14902 403 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 BDKRB1P46663 353 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 NFKB2Q00653 900 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 RFTN1Q14699 578 aaPredicted RBP11.68□□□□□ -0.54
PTPRN-204ENST00000423636 CYP27C1Q4G0S4 372 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 LIN52Q52LA3 116 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 INO80DQ53TQ3 878 aaPredicted RBP11.68□□□□□ -0.54
PTPRN-204ENST00000423636 GPRC6AQ5T6X5 926 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 KLHDC10Q6PID8 442 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 DOK6Q6PKX4 331 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 ANKRD33Q7Z3H0 272 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 SELENOMQ8WWX9 145 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 AIG1Q9NVV5 245 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 SARDHQ9UL12 918 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 PLAGL1Q9UM63 463 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 PDE10AQ9Y233 779 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 LATO43561 262 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 MAN1A2O60476 641 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 PRAMEF4O60810 478 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 CAPN15O75808 1086 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 SNAP29O95721 258 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 MLYCDO95822 493 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 PDYNP01213 254 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 C1SP09871 688 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 XPAP23025 273 aaPredicted RBP11.68□□□□□ -0.54
PTPRN-204ENST00000423636 HERC3Q15034 1050 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 PABPC1LQ4VXU2 614 aaKnown RBP11.68□□□□□ -0.54
PTPRN-204ENST00000423636 PRAMEF9Q5VWM5 478 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 KLK6Q92876 244 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 VCX3BQ9H321 246 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 IGFLR1Q9H665 355 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 GNPTGQ9UJJ9 305 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 A0A1W2PP18 115 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 LSM1O15116 133 aaKnown RBP11.68□□□□□ -0.54
PTPRN-204ENST00000423636 NTRK1P04629 796 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 CTSLP07711 333 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 SLC6A11P48066 632 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 ADARP55265 1226 aaKnown RBP11.68□□□□□ -0.54
PTPRN-204ENST00000423636 SNRPD1P62314 119 aaKnown RBP11.68□□□□□ -0.54
PTPRN-204ENST00000423636 MPPE1Q53F39 396 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 GLYATQ6IB77 296 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 ITIH5Q86UX2 942 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 ELMOD1Q8N336 334 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 TCF12Q99081 682 aa11.68□□□□□ -0.54
PTPRN-204ENST00000423636 GRM6O15303 877 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 TLL1O43897 1013 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 SMIM18P0DKX4 95 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 PABPC1P11940 636 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms