RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 SEMG2Q02383 582 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 SRSF1Q07955 248 aaKnown RBP eCLIP5.65□□□□□ -1.5
LINC00458-201ENST00000423442 ELP6Q0PNE2 266 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 SMAD1Q15797 465 aaKnown RBP5.65□□□□□ -1.5
LINC00458-201ENST00000423442 KIF19Q2TAC6 998 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 RAB6CQ53S08 254 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 FAM72AQ5TYM5 149 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 NAPEPLDQ6IQ20 393 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 FAM72DQ6L9T8 149 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 KIAA1161Q6NSJ0 714 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 ERAP2Q6P179 960 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 TMCO3Q6UWJ1 677 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 DHRS13Q6UX07 377 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 LEKR1Q6ZMV7 388 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 RFX8Q6ZV50 586 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 H2AFVQ71UI9 128 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 IQCHQ86VS3 1027 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 NLRP14Q86W24 1093 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 TRIM69Q86WT6 500 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 HORMAD1Q86X24 394 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 FAM72BQ86X60 149 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 DNAAF5Q86Y56 855 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 LRRC49Q8IUZ0 686 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 CNGA4Q8IV77 575 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 RAVER1Q8IY67 606 aaKnown RBP5.65□□□□□ -1.5
LINC00458-201ENST00000423442 NDUFAF2Q8N183 169 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 SLC35B2Q8TB61 432 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 HCAR2Q8TDS4 363 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 HSPH1Q92598 858 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 Q96MF0 132 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 ZNF641Q96N77 438 aaPredicted RBP5.65□□□□□ -1.5
LINC00458-201ENST00000423442 MAK16Q9BXY0 300 aaKnown RBP5.65□□□□□ -1.5
LINC00458-201ENST00000423442 MAGEB5Q9BZ81 275 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 TM6SF2Q9BZW4 377 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 SEMA4CQ9C0C4 833 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 TTYH3Q9C0H2 523 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 RAB6CQ9H0N0 254 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 UBA2Q9UBT2 640 aaPredicted RBP5.65□□□□□ -1.5
LINC00458-201ENST00000423442 SERGEFQ9UGK8 458 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 ANAPC7Q9UJX3 599 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 SARDHQ9UL12 918 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 BTBD3Q9Y2F9 522 aa5.65□□□□□ -1.5
LINC00458-201ENST00000423442 CHD5Q8TDI0 1954 aa5.65□□□□□ -1.51
LINC00458-201ENST00000423442 PIEZO2Q9H5I5 2752 aa5.65□□□□□ -1.51
LINC00458-201ENST00000423442 ANKRD36A6QL64 1941 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 A0A087X0T9 212 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 CAPN8A6NHC0 703 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 TMEM110-MUSTN1A8MSY1 372 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 AKR1B15C9JRZ8 316 aaPredicted RBP5.64□□□□□ -1.51
LINC00458-201ENST00000423442 MGST3O14880 152 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 RRP8O43159 456 aaKnown RBP5.64□□□□□ -1.51
LINC00458-201ENST00000423442 TNFSF14O43557 240 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 LATO43561 262 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 AP1G1O43747 822 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 PCDHGA12O60330 932 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 ZMPSTE24O75844 475 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 IPO7O95373 1038 aaKnown RBP5.64□□□□□ -1.51
LINC00458-201ENST00000423442 LDOC1O95751 146 aaPredicted RBP5.64□□□□□ -1.51
LINC00458-201ENST00000423442 PAK4O96013 591 aaPredicted RBP5.64□□□□□ -1.51
LINC00458-201ENST00000423442 UGT2B4P06133 528 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 IGHV4-34P06331 123 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 ELANEP08246 267 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 KRT7P08729 469 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 FAM228BP0C875 321 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 ADRB3P13945 408 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 ERCC2P18074 760 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 HNRNPA2B1P22626 353 aaKnown RBP5.64□□□□□ -1.51
LINC00458-201ENST00000423442 SERPINA4P29622 427 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 SERPINB6P35237 376 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 DRD3P35462 400 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 ARHGAP25P42331 645 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 CDKN1CP49918 316 aaPredicted RBP5.64□□□□□ -1.51
LINC00458-201ENST00000423442 SCNN1BP51168 640 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 THOP1P52888 689 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 MANFP55145 182 aaKnown RBP5.64□□□□□ -1.51
LINC00458-201ENST00000423442 ADKP55263 362 aaKnown RBP5.64□□□□□ -1.51
LINC00458-201ENST00000423442 CLDN6P56747 220 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 CXADRP78310 365 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 BNC1Q01954 994 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 ITKQ08881 620 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 NSUN2Q08J23 767 aaKnown RBP eCLIP5.64□□□□□ -1.51
LINC00458-201ENST00000423442 PTK2BQ14289 1009 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 RFTN1Q14699 578 aaPredicted RBP5.64□□□□□ -1.51
LINC00458-201ENST00000423442 PDK2Q15119 407 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 SPA17Q15506 151 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 SLC18A3Q16572 532 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 TAF1BQ53T94 588 aaPredicted RBP5.64□□□□□ -1.51
LINC00458-201ENST00000423442 C19orf54Q5BKX5 351 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 PRAMEF14Q5SWL7 426 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 MANEALQ5VSG8 457 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 AGAP9Q5VTM2 703 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 SRLQ86TD4 932 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 ZNF610Q8N9Z0 462 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 ZFP28Q8NHY6 868 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 CXorf40AQ8TE69 158 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 SNX33Q8WV41 574 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 TEKT4Q8WW24 435 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 KLK6Q92876 244 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 HMCESQ96FZ2 354 aa5.64□□□□□ -1.51
LINC00458-201ENST00000423442 CELF6Q96J87 481 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms