RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 TLCD2A6NGC4 264 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 MROH6A6NGR9 719 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 ERI2A8K979 691 aaKnown RBP9.03□□□□□ -0.96
NUP50-206ENST00000422489 BTN3A3O00478 584 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 ARHGAP6O43182 974 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 SCRG1O75711 98 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 AP2A2O94973 939 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 GOT2P00505 430 aaKnown RBP9.03□□□□□ -0.96
NUP50-206ENST00000422489 FTH1P02794 183 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 OR56A5P0C7T3 313 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 ADRA1DP25100 572 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 PRDX3P30048 256 aaKnown RBP9.03□□□□□ -0.96
NUP50-206ENST00000422489 RPL22P35268 128 aaKnown RBP9.03□□□□□ -0.96
NUP50-206ENST00000422489 CD151P48509 253 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 TERF1P54274 439 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 SESN2P58004 480 aaPredicted RBP9.03□□□□□ -0.96
NUP50-206ENST00000422489 RPS15P62841 145 aaKnown RBP9.03□□□□□ -0.96
NUP50-206ENST00000422489 RPA4Q13156 261 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 DNASE1L3Q13609 305 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 BOP1Q14137 746 aaKnown RBP9.03□□□□□ -0.96
NUP50-206ENST00000422489 ITIH4Q14624 930 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 OASLQ15646 514 aaKnown RBP9.03□□□□□ -0.96
NUP50-206ENST00000422489 SYTL3Q4VX76 610 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 FASTKD1Q53R41 847 aaKnown RBP9.03□□□□□ -0.96
NUP50-206ENST00000422489 TSTD2Q5T7W7 516 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 LYPLAL1Q5VWZ2 237 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 ATG14Q6ZNE5 492 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 BPHLQ86WA6 291 aaPredicted RBP9.03□□□□□ -0.96
NUP50-206ENST00000422489 AMIGO1Q86WK6 493 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 TMEM126BQ8IUX1 230 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 D2HGDHQ8N465 521 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 OR52E1Q8NGJ3 308 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 CT55Q8WUE5 264 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 MR1Q95460 341 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.03□□□□□ -0.96
NUP50-206ENST00000422489 CLIP3Q96DZ5 547 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 FCRL4Q96PJ5 515 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 HGH1Q9BTY7 390 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 TRIM4Q9C037 500 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 SLC7A5P2Q9GIP4 190 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 OR52A5Q9H2C5 316 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 ADNPQ9H2P0 1102 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 MVB12BQ9H7P6 319 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 AKIRIN1Q9H9L7 192 aaPredicted RBP9.03□□□□□ -0.96
NUP50-206ENST00000422489 LHX9Q9NQ69 397 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 SEMA5BQ9P283 1151 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 PAK5Q9P286 719 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 ANAPC5Q9UJX4 755 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 ASF1AQ9Y294 204 aa9.03□□□□□ -0.96
NUP50-206ENST00000422489 BPTFQ12830 3046 aa9.02□□□□□ -0.96
NUP50-206ENST00000422489 MATN2O00339 956 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 BTN3A1O00481 513 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 LIN7AO14910 233 aaPredicted RBP9.02□□□□□ -0.97
NUP50-206ENST00000422489 CEP104O60308 925 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 OR1I1O60431 355 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 CREG1O75629 220 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 SUN1O94901 812 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 KLK3P07288 261 aaPredicted RBP9.02□□□□□ -0.97
NUP50-206ENST00000422489 APRTP07741 180 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 FURINP09958 794 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 CCDC175P0C221 793 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 ST6GAL1P15907 406 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 KCNJ1P48048 391 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 TUBB4BP68371 445 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 PRAMEP78395 509 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 KCNC4Q03721 635 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 ABRQ12979 859 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 TUBB2AQ13885 445 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 CCNG2Q16589 344 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 PRAMEF17Q5VTA0 474 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 LDB1Q86U70 411 aaPredicted RBP9.02□□□□□ -0.97
NUP50-206ENST00000422489 TMEM135Q86UB9 458 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 GLIS1Q8NBF1 620 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 PPHLN1Q8NEY8 458 aaKnown RBP9.02□□□□□ -0.97
NUP50-206ENST00000422489 OR5AR1Q8NGP9 310 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 OR4L1Q8NH43 312 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 C9orf43Q8TAL5 461 aaPredicted RBP9.02□□□□□ -0.97
NUP50-206ENST00000422489 UBE2Q2Q8WVN8 375 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 N4BP2L2Q92802 583 aaPredicted RBP9.02□□□□□ -0.97
NUP50-206ENST00000422489 ZNF501Q96CX3 271 aaPredicted RBP9.02□□□□□ -0.97
NUP50-206ENST00000422489 ABHD17AQ96GS6 310 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 ZNF778Q96MU6 729 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 RUFY1Q96T51 708 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 TUBB2BQ9BVA1 445 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 TLR10Q9BXR5 811 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 TFB2MQ9H5Q4 396 aaKnown RBP9.02□□□□□ -0.97
NUP50-206ENST00000422489 FANCEQ9HB96 536 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 CASS4Q9NQ75 786 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 CHRAC1Q9NRG0 131 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 C1GALT1Q9NS00 363 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 SERTAD3Q9UJW9 196 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 POMT2Q9UKY4 750 aa9.02□□□□□ -0.97
NUP50-206ENST00000422489 FARSAQ9Y285 508 aaKnown RBP9.02□□□□□ -0.97
NUP50-206ENST00000422489 ARHGEF17Q96PE2 2063 aaPredicted RBP9.01□□□□□ -0.97
NUP50-206ENST00000422489 GOLGA6L3A6NEY3 463 aa9.01□□□□□ -0.97
NUP50-206ENST00000422489 C2orf74A8MZ97 194 aa9.01□□□□□ -0.97
NUP50-206ENST00000422489 ISM1B1AKI9 464 aa9.01□□□□□ -0.97
NUP50-206ENST00000422489 C21orf140B9A014 251 aa9.01□□□□□ -0.97
NUP50-206ENST00000422489 TMEM150CB9EJG8 249 aa9.01□□□□□ -0.97
NUP50-206ENST00000422489 F8W8V4 182 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms