RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 SPIN1Q9Y657 262 aaPredicted RBP3.53□□□□□ -1.84
LINC00397-201ENST00000422074 A0A0J9YWU9 116 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 E9PI62 339 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 H7C423 109 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 MITFO75030 526 aaPredicted RBP3.52□□□□□ -1.85
LINC00397-201ENST00000422074 KHDRBS3O75525 346 aaKnown RBP3.52□□□□□ -1.85
LINC00397-201ENST00000422074 RB1P06400 928 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 ACP2P11117 423 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 DPEP1P16444 411 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 TYMPP19971 482 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 DCAF7P61962 342 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 LMO4P61968 165 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 SNRPEP62304 92 aaKnown RBP3.52□□□□□ -1.85
LINC00397-201ENST00000422074 CXCL9Q07325 125 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 KCNC3Q14003 757 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 BHLHB9Q6PI77 547 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 METTL7BQ6UX53 244 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 STXBP4Q6ZWJ1 553 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 ZNF614Q8N883 585 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 ZNF383Q8NA42 475 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 HPSE2Q8WWQ2 592 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 TMEM143Q96AN5 459 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 TIGD1Q96MW7 591 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 MYADMQ96S97 322 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 ZNF701Q9NV72 531 aaPredicted RBP3.52□□□□□ -1.85
LINC00397-201ENST00000422074 EXOGQ9Y2C4 368 aaKnown RBP3.52□□□□□ -1.85
LINC00397-201ENST00000422074 PCDHGA5Q9Y5G8 931 aa3.52□□□□□ -1.85
LINC00397-201ENST00000422074 COL5A2P05997 1499 aaPredicted RBP3.52□□□□□ -1.85
LINC00397-201ENST00000422074 PRSS51A0A1B0GVH4 220 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 DNM1LO00429 736 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 TRMUO75648 421 aaKnown RBP3.51□□□□□ -1.85
LINC00397-201ENST00000422074 RSL1D1O76021 490 aaKnown RBP3.51□□□□□ -1.85
LINC00397-201ENST00000422074 SUOXP51687 545 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 NAP1L1P55209 391 aaKnown RBP3.51□□□□□ -1.85
LINC00397-201ENST00000422074 CDH11P55287 796 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 GPR17Q13304 367 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 PWWP2BQ6NUJ5 590 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 CORO6Q6QEF8 472 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 INTS8Q75QN2 995 aaKnown RBP3.51□□□□□ -1.85
LINC00397-201ENST00000422074 PPFIBP2Q8ND30 876 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 PAPD5Q8NDF8 572 aaKnown RBP3.51□□□□□ -1.85
LINC00397-201ENST00000422074 FAM81BQ96LP2 452 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 CEP295NLQ96MC4 621 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 SRSF8Q9BRL6 282 aaKnown RBP3.51□□□□□ -1.85
LINC00397-201ENST00000422074 C16orf70Q9BSU1 422 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 SYT11Q9BT88 431 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 VN1R1Q9GZP7 353 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 PLCXD1Q9NUJ7 323 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 SEPT11Q9NVA2 429 aaKnown RBP3.51□□□□□ -1.85
LINC00397-201ENST00000422074 RNF186Q9NXI6 227 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 PAK5Q9P286 719 aa3.51□□□□□ -1.85
LINC00397-201ENST00000422074 KLHL8Q9P2G9 620 aaPredicted RBP3.51□□□□□ -1.85
LINC00397-201ENST00000422074 SEC63Q9UGP8 760 aaKnown RBP3.51□□□□□ -1.85
LINC00397-201ENST00000422074 AGRNO00468 2067 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 A0A1W2PRB8 838 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 LNP1A1A4G5 178 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 SSX4O60224 188 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 ZBED4O75132 1171 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 PTP4A3O75365 173 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 PRKRAO75569 313 aaKnown RBP3.5□□□□□ -1.85
LINC00397-201ENST00000422074 CREG1O75629 220 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 BAIAP3O94812 1187 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 HMBSP08397 361 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 HOXC13P31276 330 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 GARSP41250 739 aaKnown RBP3.5□□□□□ -1.85
LINC00397-201ENST00000422074 CASP2P42575 452 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 PSMC4P43686 418 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 SNX16P57768 344 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 ARF3P61204 181 aaPredicted RBP3.5□□□□□ -1.85
LINC00397-201ENST00000422074 ARF1P84077 181 aaKnown RBP3.5□□□□□ -1.85
LINC00397-201ENST00000422074 PRKCZQ05513 592 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 IRF3Q14653 427 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 DLG2Q15700 870 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 MDH1BQ5I0G3 518 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 DCAF10Q5QP82 559 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 CYP4A22Q5TCH4 519 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 C1orf122Q6ZSJ8 110 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 TBC1D1Q86TI0 1168 aaPredicted RBP3.5□□□□□ -1.85
LINC00397-201ENST00000422074 LSMEM2Q8N112 164 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 LYG1Q8N1E2 194 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 MARVELD2Q8N4S9 558 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 MAPKAPK5-AS1Q8N8E1 139 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 ANKRD52Q8NB46 1076 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 OR1J1Q8NGS3 322 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 OR2T11Q8NH01 316 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 OR2T6Q8NHC8 308 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 MOSPD2Q8NHP6 518 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 MTERF3Q96E29 417 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 OR6C1Q96RD1 312 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 BTBD10Q9BSF8 475 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 PITPNM3Q9BZ71 974 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 LAT2Q9GZY6 243 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 EIF2B3Q9NR50 452 aaKnown RBP3.5□□□□□ -1.85
LINC00397-201ENST00000422074 INTS9Q9NV88 658 aaKnown RBP3.5□□□□□ -1.85
LINC00397-201ENST00000422074 OSGIN1Q9UJX0 560 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 SMAD5-AS1Q9Y6J3 95 aa3.5□□□□□ -1.85
LINC00397-201ENST00000422074 LOC101059948A0A1B0GTJ6 334 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 MSGN1A6NI15 193 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 HEPACAM2A8MVW5 462 aa3.49□□□□□ -1.85
LINC00397-201ENST00000422074 ZNF197O14709 1029 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms