RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 NR1D1P20393 614 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 ARCN1P48444 511 aaKnown RBP16.87■□□□□ 0.29
MSH6-203ENST00000420813 VAV2P52735 878 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 SPARCL1Q14515 664 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 IGFBP7Q16270 282 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 ZNF449Q6P9G9 518 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 ARHGEF18Q6ZSZ5 1173 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 SERPINA9Q86WD7 417 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 CPT1BQ92523 772 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 MR1Q95460 341 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 PPM1MQ96MI6 270 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 FERD3LQ96RJ6 166 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 PITPNM3Q9BZ71 974 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 TFB2MQ9H5Q4 396 aaKnown RBP16.87■□□□□ 0.29
MSH6-203ENST00000420813 MVB12BQ9H7P6 319 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 LRRC40Q9H9A6 602 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 RELNP78509 3460 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 GSAPA4D1B5 854 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 CCL22O00626 93 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 RAB40ALP0C0E4 278 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 PRDX3P30048 256 aaKnown RBP16.86■□□□□ 0.29
MSH6-203ENST00000420813 CD97P48960 835 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 ZNF75DP51815 510 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 RPS18P62269 152 aaKnown RBP16.86■□□□□ 0.29
MSH6-203ENST00000420813 UBAP2LQ14157 1087 aaKnown RBP16.86■□□□□ 0.29
MSH6-203ENST00000420813 P3H1Q32P28 736 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 ZRANB3Q5FWF4 1079 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 FBXO38Q6PIJ6 1188 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 RAD9BQ6WBX8 426 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 DSELQ8IZU8 1212 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 SLC38A9Q8NBW4 561 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 STYXQ8WUJ0 223 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 MIB2Q96AX9 1013 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 TLR10Q9BXR5 811 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 AMFRQ9UKV5 643 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 CCDC88CQ9P219 2028 aa16.86■□□□□ 0.29
MSH6-203ENST00000420813 CLEC18AA5D8T8 446 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 CYSRT1A8MQ03 144 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 MIF4GDA9UHW6 222 aaKnown RBP16.85■□□□□ 0.29
MSH6-203ENST00000420813 MEN1O00255 615 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 BTN3A3O00478 584 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 BTN3A1O00481 513 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 PSMD3O43242 534 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 MAP3K7O43318 606 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 AP2A2O94973 939 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 METTL18O95568 372 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 PTMAP06454 111 aaKnown RBP16.85■□□□□ 0.29
MSH6-203ENST00000420813 PSMA3P25788 255 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 RORAP35398 523 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 PREPP48147 710 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 CDKN1CP49918 316 aaPredicted RBP16.85■□□□□ 0.29
MSH6-203ENST00000420813 CACNG1Q06432 222 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 ABRQ12979 859 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 KLF1Q13351 362 aaPredicted RBP16.85■□□□□ 0.29
MSH6-203ENST00000420813 IL10RAQ13651 578 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 BOP1Q14137 746 aaKnown RBP16.85■□□□□ 0.29
MSH6-203ENST00000420813 PLEKHS1Q5SXH7 462 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 CLEC18BQ6UXF7 455 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 PEX26Q7Z412 305 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 SYCE1Q8N0S2 351 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 UBL4BQ8N7F7 174 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 FAM71DQ8N9W8 422 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 CLEC18CQ8NCF0 446 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 OR52E1Q8NGJ3 308 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 CDKN2AIPNLQ96HQ2 116 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 TRIM55Q9BYV6 548 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 CHST8Q9H2A9 424 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 PCDHGA9Q9Y5G4 932 aaKnown RBP16.85■□□□□ 0.29
MSH6-203ENST00000420813 ANKRD12Q6UB98 2062 aa16.85■□□□□ 0.29
MSH6-203ENST00000420813 C2orf74A8MZ97 194 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 QSOX1O00391 747 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 DNAJB5O75953 348 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 AP2A1O95782 977 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 ST6GAL1P15907 406 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 PDHA2P29803 388 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 ITIH4Q14624 930 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 POU6F1Q14863 301 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 ZNF789Q5FWF6 425 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 TAS2R42Q7RTR8 314 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 KIAA1328Q86T90 577 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 AMIGO1Q86WK6 493 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 PIANPQ8IYJ0 282 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 ACRBPQ8NEB7 543 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 SLC35B2Q8TB61 432 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 ADAMTS17Q8TE56 1095 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 TFGQ92734 400 aaPredicted RBP16.84■□□□□ 0.29
MSH6-203ENST00000420813 CLIP3Q96DZ5 547 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 NLNQ9BYT8 704 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 MLXIPLQ9NP71 852 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 ANKMY1Q9P2S6 941 aa16.84■□□□□ 0.29
MSH6-203ENST00000420813 MROH6A6NGR9 719 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 TMEM150CB9EJG8 249 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 LIN7AO14910 233 aaPredicted RBP16.83■□□□□ 0.28
MSH6-203ENST00000420813 PDGFAP04085 211 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 PRSS56P0CW18 603 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 TPH1P17752 444 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 CYP2A7P20853 494 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 NSG1P42857 185 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 SRSF1Q07955 248 aaKnown RBP eCLIP16.83■□□□□ 0.28
MSH6-203ENST00000420813 DBN1Q16643 649 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms