RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SPATA1Q5VX52 437 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 KRTAP5-11Q6L8G4 156 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 TMCO3Q6UWJ1 677 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 LINGO4Q6UY18 593 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 ISCA2Q86U28 154 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 DNAJC22Q8N4W6 341 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 ZNF383Q8NA42 475 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 FGFBP3Q8TAT2 258 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 CCDC34Q96HJ3 373 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 LRR1Q96L50 414 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 MYADMQ96S97 322 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 ARRDC1-AS1Q9H2J1 176 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 TBC1D17Q9HA65 648 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 COQ3Q9NZJ6 369 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 TMEM181Q9P2C4 612 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 ZHX1Q9UKY1 873 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 MTUS1Q9ULD2 1270 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 KCNJ14Q9UNX9 436 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 DISP3Q9P2K9 1392 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 ZNF541Q9H0D2 1346 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 GPR75-ASB3A0A0A6YYF3 556 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 IGLV9-49A0A0B4J1Y8 123 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 HHLA1C9JL84 531 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 ZNF197O14709 1029 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 EIF2DP41214 584 aaKnown RBP4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 NKX2-1P43699 371 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 LGALS3BPQ08380 585 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 P2RY6Q15077 328 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 KRTAP27-1Q3LI81 207 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 TMEM211Q6ICI0 200 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 SH2D5Q6ZV89 423 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 ZNF595Q8IYB9 648 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 WDSUB1Q8N9V3 476 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 OR5M8Q8NGP6 311 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 OR13J1Q8NGT2 312 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 RNF128Q8TEB7 428 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 HSD17B8Q92506 261 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 PRAC1Q96KF2 57 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 ABHD1Q96SE0 405 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 RTP3Q9BQQ7 232 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 GFRA4Q9GZZ7 299 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 UBA5Q9GZZ9 404 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 ZNF71Q9NQZ8 489 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 RABGAP1Q9Y3P9 1069 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 PYGO1Q9Y3Y4 419 aa4.02□□□□□ -1.77
HMGB1P49-201ENST00000418882 ZNF644Q9H582 1327 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 STK36Q9NRP7 1315 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 A0A1W2PRB8 838 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 MED19A0JLT2 244 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 HYKKA2RU49 373 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 ADAM20O43506 726 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 TSPAN9O75954 239 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 BEST1O76090 585 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 CGAP01215 116 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 VPREB1P12018 145 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 CEACAM1P13688 526 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 DNASE1P24855 282 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 HSD17B4P51659 736 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 ARSEP51690 589 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 CDH13P55290 713 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 TPD52P55327 224 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 HNRNPKP61978 463 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 RPS18P62269 152 aaKnown RBP4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 CDK3Q00526 305 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 STK4Q13043 487 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 GUF1Q8N442 669 aaKnown RBP4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 TRIML1Q8N9V2 468 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 OR1J1Q8NGS3 322 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 ZNF622Q969S3 477 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 MTERF3Q96E29 417 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 SGK494Q96LW2 274 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 FNDC11Q9BVV2 318 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 OSGEPL1Q9H4B0 414 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 SLC35C2Q9NQQ7 365 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 OSGIN1Q9UJX0 560 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 SLC7A7Q9UM01 511 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 KCNK7Q9Y2U2 307 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 RIPK3Q9Y572 518 aa4.01□□□□□ -1.77
HMGB1P49-201ENST00000418882 A0A0G2JLW4 131 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 ANKUB1A6NFN9 424 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 TMEM221A6NGB7 291 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 NR5A2O00482 541 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 GAPDHSO14556 408 aaPredicted RBP4□□□□□ -1.77
HMGB1P49-201ENST00000418882 ZNF821O75541 412 aaPredicted RBP4□□□□□ -1.77
HMGB1P49-201ENST00000418882 WDPCPO95876 746 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 CLPTM1O96005 669 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 ITGA3P26006 1051 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 CEACAM8P31997 349 aaPredicted RBP4□□□□□ -1.77
HMGB1P49-201ENST00000418882 STAT2P52630 851 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 CLNS1AP54105 237 aaKnown RBP4□□□□□ -1.77
HMGB1P49-201ENST00000418882 CX3CL1P78423 397 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 FCN2Q15485 313 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 PHLDA2Q53GA4 152 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 MDH1BQ5I0G3 518 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 FFAR4Q5NUL3 377 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 DHRS7BQ6IAN0 325 aaPredicted RBP4□□□□□ -1.77
HMGB1P49-201ENST00000418882 TAGAPQ8N103 731 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 AFAP1Q8N556 730 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 MAPKAPK5-AS1Q8N8E1 139 aa4□□□□□ -1.77
HMGB1P49-201ENST00000418882 KBTBD8Q8NFY9 601 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms