RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 DDX39BQ13838 428 aaKnown RBP11.68□□□□□ -0.54
LIMK1-202ENST00000418310 SF1Q15637 639 aaKnown RBP11.68□□□□□ -0.54
LIMK1-202ENST00000418310 TRIM71Q2Q1W2 868 aaKnown RBP11.68□□□□□ -0.54
LIMK1-202ENST00000418310 HECTD3Q5T447 861 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 FBXO22Q8NEZ5 403 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 CNIH3Q8TBE1 160 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 KCNJ9Q92806 393 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 OR52E6Q96RD3 313 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 OPTCQ9UBM4 332 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 MAGEL2Q9UJ55 1249 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 MYO7AQ13402 2215 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 UPK1AO00322 258 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 AXIN1O15169 862 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 RAD51BO15315 384 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 MTX2O75431 263 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 CR2P20023 1033 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 FAM189BP81408 668 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 IL5RAQ01344 420 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 KCNAB2Q13303 367 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 CDH18Q13634 790 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 CRY1Q16526 586 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 SUSD1Q6UWL2 747 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 RFLNAQ6ZTI6 216 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 TMEM179BQ7Z7N9 219 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 TSPAN33Q86UF1 283 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 PTRH1Q86Y79 214 aaKnown RBP11.67□□□□□ -0.54
LIMK1-202ENST00000418310 TTC30BQ8N4P2 665 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 AUTS2Q8WXX7 1259 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 EBPLQ9BY08 206 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 PCDHB3Q9Y5E6 796 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 CORINQ9Y5Q5 1042 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 FNDC1Q4ZHG4 1894 aaPredicted RBP11.67□□□□□ -0.54
LIMK1-202ENST00000418310 SYN3O14994 580 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 TAPBPO15533 448 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 CLDN11O75508 207 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 GLUD1P00367 558 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 FTH1P02794 183 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 RAP2AP10114 183 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 MBL2P11226 248 aaPredicted RBP11.67□□□□□ -0.54
LIMK1-202ENST00000418310 CSKP41240 450 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 MAGEA11P43364 429 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 CASP9P55211 416 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 FCGRTP55899 365 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 SMAD3P84022 425 aaKnown RBP11.67□□□□□ -0.54
LIMK1-202ENST00000418310 HSPA14Q0VDF9 509 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 TRAF3Q13114 568 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 ITGADQ13349 1161 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 ANKS3Q6ZW76 656 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 EFL1Q7Z2Z2 1120 aaKnown RBP11.67□□□□□ -0.54
LIMK1-202ENST00000418310 RBM23Q86U06 439 aaKnown RBP11.67□□□□□ -0.54
LIMK1-202ENST00000418310 PROSER1Q86XN7 944 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 RGL4Q8IZJ4 473 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 C8orf59Q8N0T1 100 aaPredicted RBP11.67□□□□□ -0.54
LIMK1-202ENST00000418310 TBC1D15Q8TC07 691 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 SLC22A17Q8WUG5 538 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 SCLYQ96I15 445 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 EGLN2Q96KS0 407 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 PRDM8Q9NQV8 689 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 VWA8A3KMH1 1905 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 ULK1O75385 1050 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 CD160O95971 181 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 SERPINA1P01009 418 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 CCNA2P20248 432 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 AKT1P31749 480 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 ALDH3A2P51648 485 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 MLLT10P55197 1068 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 ADARB1P78563 741 aaKnown RBP11.67□□□□□ -0.54
LIMK1-202ENST00000418310 FPGSQ05932 587 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 RING1Q06587 406 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 SPOUT1Q5T280 376 aaKnown RBP11.67□□□□□ -0.54
LIMK1-202ENST00000418310 CXorf57Q6NSI4 855 aaKnown RBP11.67□□□□□ -0.54
LIMK1-202ENST00000418310 BPIFB1Q8TDL5 484 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 MYLIPQ8WY64 445 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 TANKQ92844 425 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 BARD1Q99728 777 aaKnown RBP11.67□□□□□ -0.54
LIMK1-202ENST00000418310 RHNO1Q9BSD3 238 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 INPP5KQ9BT40 448 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 AMBRA1Q9C0C7 1298 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 CD320Q9NPF0 282 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 TBC1D23Q9NUY8 699 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 SLC25A37Q9NYZ2 338 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 CD84Q9UIB8 345 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 EIF3LQ9Y262 564 aaKnown RBP11.67□□□□□ -0.54
LIMK1-202ENST00000418310 ARIH1Q9Y4X5 557 aaPredicted RBP11.67□□□□□ -0.54
LIMK1-202ENST00000418310 SCN4AP35499 1836 aa11.67□□□□□ -0.54
LIMK1-202ENST00000418310 C5orf42Q9H799 3197 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 A0A1B0GVM2 712 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 ZNF840PA6NDX5 716 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 OR6C75A6NL08 312 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 CXCR6O00574 342 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 BCL10O95999 233 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 OTCP00480 354 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 ESR1P03372 595 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 ALPLP05186 524 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 PGRP06401 933 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 FMO3P31513 532 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 PTGER3P43115 390 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 ZXDBP98169 803 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 NFATC3Q12968 1075 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 PWP1Q13610 501 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms