RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 NUDT1P36639 197 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 HSD17B2P37059 387 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 PPARGP37231 505 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 CASP2P42575 452 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 TXKP42681 527 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 CCR5P51681 352 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 AP3M2P53677 418 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 MAPK10P53779 464 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 SLC16A1P53985 500 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 CACNA2D1P54289 1103 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 POLR2FP61218 127 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 OSTNP61366 133 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 NCALDP61601 193 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 MRPS15P82914 257 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 GBE1Q04446 702 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 OVGP1Q12889 678 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 TBX2Q13207 712 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 ART3Q13508 389 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 RAPGEF1Q13905 1077 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 TRIM14Q14142 442 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 CNGA2Q16280 664 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 C3orf36Q3SXR2 165 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 GALNTL6Q49A17 601 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 FAM133BQ5BKY9 247 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 RNF220Q5VTB9 566 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 TCERG1LQ5VWI1 586 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 SLX4IPQ5VYV7 408 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 NAPEPLDQ6IQ20 393 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 NCEH1Q6PIU2 408 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 RANBP10Q6VN20 620 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 B3GNT6Q6ZMB0 384 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 PPP1R21Q6ZMI0 780 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 NET1Q7Z628 596 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 MMAAQ8IVH4 418 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 VSTM4Q8IW00 320 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 DCP1BQ8IZD4 617 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 MMGT1Q8N4V1 131 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 LILRB4Q8NHJ6 448 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 HCAR2Q8TDS4 363 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 PYROXD1Q8WU10 500 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 TMEM159Q96B96 161 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 TBC1D20Q96BZ9 403 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 INTS12Q96CB8 462 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 ARSGQ96EG1 525 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 C1GALT1C1Q96EU7 318 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 P2RY11Q96G91 374 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 MAELQ96JY0 434 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 HIST1H2AHQ96KK5 128 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 TNIP3Q96KP6 325 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 CCDC138Q96M89 665 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 CFAP57Q96MR6 1250 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 BIRC8Q96P09 236 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 NOX5Q96PH1 765 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 CIB1Q99828 191 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 HIST1H2AJQ99878 128 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 BBS2Q9BXC9 721 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 MRPL1Q9BYD6 325 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 DNAI2Q9GZS0 605 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 DDX47Q9H0S4 455 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 C2orf40Q9H1Z8 148 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 MOV10Q9HCE1 1003 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 ARHGEF38Q9NXL2 777 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 ADAM22Q9P0K1 906 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 WRAP73Q9P2S5 460 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 GRID1Q9ULK0 1009 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 VANGL2Q9ULK5 521 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 NCKAP1Q9Y2A7 1128 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 DNAJC16Q9Y2G8 782 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 IFT52Q9Y366 437 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 A0A0B4J269 797 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 LRRC72A6NJI9 287 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 OR6C65A6NJZ3 312 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 SNTNA6NMZ2 147 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 RASA4BC9J798 803 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 D6RAR5 112 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 H3BML4 177 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 hCG_1984214I3L0E3 225 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 ACKR2O00590 384 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 NTN3O00634 580 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 ADAMTS3O15072 1205 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 SCAMP1O15126 338 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 RASA4O43374 803 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 KCNAB3O43448 404 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 TUSC2O75896 110 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 TSPAN9O75954 239 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 CRYZL1O95825 349 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 ABCB1P08183 1280 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 TPBGLP0DKB5 382 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 MBL2P11226 248 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 GZMAP12544 262 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 RHCEP18577 417 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 ACO1P21399 889 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 SERPINB3P29508 390 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 LRPAP1P30533 357 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 CCKBRP32239 447 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 ETV5P41161 510 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 SLC1A1P43005 524 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 MSH2P43246 934 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 RGS7P49802 495 aa5.44□□□□□ -1.54
ECHDC1-206ENST00000417628 NEK3P51956 506 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms