RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 PGGT1BP53609 377 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 EIF3BP55884 814 aaKnown RBP9.94□□□□□ -0.82
HDLBP-206ENST00000417540 GNG11P61952 73 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 FOXM1Q08050 763 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 C2orf54Q08AI8 447 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 PTK6Q13882 451 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 GPR19Q15760 415 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 CLPPQ16740 277 aaPredicted RBP9.94□□□□□ -0.82
HDLBP-206ENST00000417540 TYSND1Q2T9J0 566 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 FASTKD1Q53R41 847 aaKnown RBP9.94□□□□□ -0.82
HDLBP-206ENST00000417540 PCID2Q5JVF3 399 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 DNTTIP2Q5QJE6 756 aaKnown RBP9.94□□□□□ -0.82
HDLBP-206ENST00000417540 CACHD1Q5VU97 1274 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 FAM69BQ5VUD6 431 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 OOSP2Q86WS3 158 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 DENND6AQ8IWF6 608 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 KLHL7Q8IXQ5 586 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 AVL9Q8NBF6 648 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 MAIP1Q8WWC4 291 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 LPGAT1Q92604 370 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 TTC9Q92623 222 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 SH3KBP1Q96B97 665 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 ZNF514Q96K75 400 aaPredicted RBP9.94□□□□□ -0.82
HDLBP-206ENST00000417540 OR6C1Q96RD1 312 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 MENTQ9BUN1 341 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 DDA1Q9BW61 102 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.94□□□□□ -0.82
HDLBP-206ENST00000417540 IL22Q9GZX6 179 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 FBXO6Q9NRD1 293 aaPredicted RBP9.94□□□□□ -0.82
HDLBP-206ENST00000417540 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.94□□□□□ -0.82
HDLBP-206ENST00000417540 POMT2Q9UKY4 750 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 RIMKLBQ9ULI2 386 aa9.94□□□□□ -0.82
HDLBP-206ENST00000417540 FLNBO75369 2602 aaKnown RBP9.94□□□□□ -0.82
HDLBP-206ENST00000417540 TNRC6AQ8NDV7 1962 aaKnown RBP9.94□□□□□ -0.82
HDLBP-206ENST00000417540 ZCWPW2A0A1B0GU75 182 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 TLCD2A6NGC4 264 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 STMND1H3BQB6 276 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 TMX2-CTNND1H3BSU7 103 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 K7ENP7 123 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 NVLO15381 856 aaKnown RBP9.93□□□□□ -0.82
HDLBP-206ENST00000417540 KIAA0754O94854 1291 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 AP2A2O94973 939 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 VAPBO95292 243 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 ATXN8OSP0DMR3 200 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 ST6GAL1P15907 406 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 F8A1P23610 371 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 PSMB5P28074 263 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 ACADLP28330 430 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 MLLT3P42568 568 aaPredicted RBP9.93□□□□□ -0.82
HDLBP-206ENST00000417540 FOXL2P58012 376 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 MC2RQ01718 297 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 TUBB3Q13509 450 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 CUL1Q13616 776 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 GRB7Q14451 532 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 GSE1Q14687 1217 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 FASTKD3Q14CZ7 662 aaKnown RBP9.93□□□□□ -0.82
HDLBP-206ENST00000417540 ZIC1Q15915 447 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 SKIDA1Q1XH10 827 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 IZUMO3Q5VZ72 239 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 ZNF470Q6ECI4 717 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 KIAA0930Q6ICG6 404 aaPredicted RBP9.93□□□□□ -0.82
HDLBP-206ENST00000417540 CASC4Q6P4E1 433 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 INO80CQ6PI98 192 aaPredicted RBP9.93□□□□□ -0.82
HDLBP-206ENST00000417540 CREG2Q8IUH2 290 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 IGDCC3Q8IVU1 814 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 TMEM151BQ8IW70 566 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 C2orf73Q8N5S3 287 aaPredicted RBP9.93□□□□□ -0.82
HDLBP-206ENST00000417540 OR4E2Q8NGC2 313 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 FLVCR1-AS1Q8TAF5 88 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 NKD1Q969G9 470 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.93□□□□□ -0.823e-6■■■■■ 50
HDLBP-206ENST00000417540 TAAR9Q96RI9 348 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 FERD3LQ96RJ6 166 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 NAPGQ99747 312 aaPredicted RBP9.93□□□□□ -0.82
HDLBP-206ENST00000417540 C19orf43Q9BQ61 176 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 KIFC1Q9BW19 673 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 AKIRIN1Q9H9L7 192 aaPredicted RBP9.93□□□□□ -0.82
HDLBP-206ENST00000417540 MRM3Q9HC36 420 aaKnown RBP9.93□□□□□ -0.82
HDLBP-206ENST00000417540 ASIC3Q9UHC3 531 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 IL17BQ9UHF5 180 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 PILRAQ9UKJ1 303 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 KLHL20Q9Y2M5 609 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 TDRKHQ9Y2W6 561 aaKnown RBP9.93□□□□□ -0.82
HDLBP-206ENST00000417540 MED16Q9Y2X0 877 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 PCDHGA3Q9Y5H0 932 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 DNMT3AQ9Y6K1 912 aaPredicted RBP9.93□□□□□ -0.82
HDLBP-206ENST00000417540 CCDC88CQ9P219 2028 aa9.93□□□□□ -0.82
HDLBP-206ENST00000417540 ANKRD12Q6UB98 2062 aa9.92□□□□□ -0.82
HDLBP-206ENST00000417540 ASH1LQ9NR48 2969 aaKnown RBP9.92□□□□□ -0.82
HDLBP-206ENST00000417540 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-206ENST00000417540 DNALI1O14645 258 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-206ENST00000417540 TP73O15350 636 aa9.92□□□□□ -0.82
HDLBP-206ENST00000417540 CD3EAPO15446 510 aaKnown RBP9.92□□□□□ -0.82
HDLBP-206ENST00000417540 TTI1O43156 1089 aa9.92□□□□□ -0.82
HDLBP-206ENST00000417540 GAS8O95995 478 aa9.92□□□□□ -0.82
HDLBP-206ENST00000417540 FTH1P02794 183 aa9.92□□□□□ -0.82
HDLBP-206ENST00000417540 PRKAR1AP10644 381 aa9.92□□□□□ -0.82
HDLBP-206ENST00000417540 PKLRP30613 574 aa9.92□□□□□ -0.82
HDLBP-206ENST00000417540 RPS18P62269 152 aaKnown RBP9.92□□□□□ -0.82
HDLBP-206ENST00000417540 DHX9Q08211 1270 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms