RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 HTR4Q13639 388 aa18.82■□□□□ 0.6
RAB3IP-205ENST00000417413 MAPRE2Q15555 327 aa18.82■□□□□ 0.6
RAB3IP-205ENST00000417413 C2orf27AQ580R0 203 aa18.82■□□□□ 0.6
RAB3IP-205ENST00000417413 TMEM220Q6QAJ8 160 aa18.82■□□□□ 0.6
RAB3IP-205ENST00000417413 SCIMPQ6UWF3 145 aa18.82■□□□□ 0.6
RAB3IP-205ENST00000417413 CHCHD4Q8N4Q1 142 aa18.82■□□□□ 0.6
RAB3IP-205ENST00000417413 ENDOVQ8N8Q3 282 aaKnown RBP18.82■□□□□ 0.6
RAB3IP-205ENST00000417413 CDX2Q99626 313 aaPredicted RBP18.82■□□□□ 0.6
RAB3IP-205ENST00000417413 CCT7Q99832 543 aa18.82■□□□□ 0.6
RAB3IP-205ENST00000417413 TRIM54Q9BYV2 358 aa18.82■□□□□ 0.6
RAB3IP-205ENST00000417413 EFCAB1Q9HAE3 211 aa18.82■□□□□ 0.6
RAB3IP-205ENST00000417413 CD248Q9HCU0 757 aa18.82■□□□□ 0.6
RAB3IP-205ENST00000417413 SLC5A10A0PJK1 596 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 LILRB5O75023 590 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 STK16O75716 305 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 MATN4O95460 622 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 GPR1P46091 355 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 HTR6P50406 440 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 CCNG1P51959 295 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 TBL3Q12788 808 aaKnown RBP18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 BCL7AQ4VC05 210 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 C16orf89Q6UX73 402 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 SPATA19Q7Z5L4 167 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 MILR1Q7Z6M3 343 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 ADGRG6Q86SQ4 1221 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 FUNDC1Q8IVP5 155 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 CHPFQ8IZ52 775 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 TCAIMQ8N3R3 496 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 AADATQ8N5Z0 425 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 ZNF513Q8N8E2 541 aaPredicted RBP18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 SNX31Q8N9S9 440 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 METTL6Q8TCB7 284 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 CXorf40AQ8TE69 158 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 SKA2Q8WVK7 121 aaPredicted RBP18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 HLA-CQ95604 372 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 ATP6V1E2Q96A05 226 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 P2RY13Q9BPV8 354 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 NTMT1Q9BV86 223 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 PFDN4Q9NQP4 134 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 ANGPTL3Q9Y5C1 460 aa18.81■□□□□ 0.6
RAB3IP-205ENST00000417413 FBP2O00757 339 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 CHUKO15111 745 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 NPC1O15118 1278 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 MID1O15344 667 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 KATNA1O75449 491 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 CIB2O75838 187 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 EPORP19235 508 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 MRPL19P49406 292 aaKnown RBP18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 TAS2R38P59533 333 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 IRX1P78414 480 aaPredicted RBP18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 CST6Q15828 149 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 CCDC85BQ15834 202 aaPredicted RBP18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 TRMT5Q32P41 509 aaKnown RBP18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 RAET1GQ6H3X3 334 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 PAOXQ6QHF9 649 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 RIPOR1Q6ZS17 1223 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 Q6ZSR9 355 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 TRIM74Q86UV6 250 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 OR9I1Q8NGQ6 314 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 CSGALNACT1Q8TDX6 532 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 GLMNQ92990 594 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 NPAS2Q99743 824 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 SLC32A1Q9H598 525 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 CCDC167Q9P0B6 97 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 L3MBTL1Q9Y468 752 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 GPR45Q9Y5Y3 372 aa18.8■□□□□ 0.6
RAB3IP-205ENST00000417413 C5orf42Q9H799 3197 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 AP1G1O43747 822 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 SNRPB2P08579 225 aaKnown RBP18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 GSTM1P09488 218 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 HIST1H2AGP0C0S8 130 aaPredicted RBP18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 HIST1H2ADP20671 130 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 CYP2A7P20853 494 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 SLC6A12P48065 614 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 STX1BP61266 288 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 GSTM4Q03013 218 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 STX5Q13190 355 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 GSTA3Q16772 222 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 AGBL4Q5VU57 503 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 PGAM4Q8N0Y7 254 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 LILRA3Q8N6C8 439 aaPredicted RBP18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 MCOLN3Q8TDD5 553 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 HIST1H2AHQ96KK5 128 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 HIST1H2AJQ99878 128 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 H2AFJQ9BTM1 129 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 TRIM39Q9HCM9 518 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 SDR39U1Q9NRG7 319 aaPredicted RBP18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 RIC8BQ9NVN3 520 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 GULP1Q9UBP9 304 aa18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 PRPF19Q9UMS4 504 aaKnown RBP18.79■□□□□ 0.6
RAB3IP-205ENST00000417413 GRXCR2A6NFK2 248 aa18.78■□□□□ 0.6
RAB3IP-205ENST00000417413 MBTPS2O43462 519 aa18.78■□□□□ 0.6
RAB3IP-205ENST00000417413 PSIP1O75475 530 aaKnown RBP18.78■□□□□ 0.6
RAB3IP-205ENST00000417413 PDE5AO76074 875 aa18.78■□□□□ 0.6
RAB3IP-205ENST00000417413 SORBS2O94875 1100 aaKnown RBP18.78■□□□□ 0.6
RAB3IP-205ENST00000417413 LMNAP02545 664 aaKnown RBP18.78■□□□□ 0.6
RAB3IP-205ENST00000417413 EBLN1P0CF75 366 aa18.78■□□□□ 0.6
RAB3IP-205ENST00000417413 EPB42P16452 691 aa18.78■□□□□ 0.6
RAB3IP-205ENST00000417413 ARL1P40616 181 aaPredicted RBP18.78■□□□□ 0.6
RAB3IP-205ENST00000417413 PIK3CGP48736 1102 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms