RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 FAM118BQ9BPY3 351 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 C19orf43Q9BQ61 176 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 FERMT1Q9BQL6 677 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 NLNQ9BYT8 704 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 OR52A5Q9H2C5 316 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 COG4Q9H9E3 785 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 FANCEQ9HB96 536 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 ARNT2Q9HBZ2 717 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 SYTL2Q9HCH5 934 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 PCMTD2Q9NV79 361 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 TCFL5Q9UL49 500 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 VPS4AQ9UN37 437 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 SNX7Q9UNH6 387 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 EFR3BQ9Y2G0 817 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 PCDHA3Q9Y5H8 950 aa14.39□□□□□ -0.11
RPS28-201ENST00000417088 UTP20O75691 2785 aaKnown RBP14.38□□□□□ -0.11
RPS28-201ENST00000417088 IGLV3-16A0A075B6K0 115 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 GSAPA4D1B5 854 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 TMEM150CB9EJG8 249 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 CFAP99D6REC4 459 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 BTN3A1O00481 513 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 KCNN4O15554 427 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 PJA2O43164 708 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 LDB2O43679 373 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 SORBS2O94875 1100 aaKnown RBP14.38□□□□□ -0.11
RPS28-201ENST00000417088 MSL3P1P0C860 447 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 PDHA2P29803 388 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 CTNNA1P35221 906 aaKnown RBP14.38□□□□□ -0.11
RPS28-201ENST00000417088 HADHAP40939 763 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 LMAN1P49257 510 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 CDKN1CP49918 316 aaPredicted RBP14.38□□□□□ -0.11
RPS28-201ENST00000417088 EIF3EP60228 445 aaKnown RBP14.38□□□□□ -0.11
RPS28-201ENST00000417088 SPARCL1Q14515 664 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 FAM69BQ5VUD6 431 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 DARS2Q6PI48 645 aaKnown RBP14.38□□□□□ -0.11
RPS28-201ENST00000417088 EFCAB3Q8N7B9 438 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 OR52E1Q8NGJ3 308 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 CCDC110Q8TBZ0 833 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 SPATA13Q96N96 652 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 TRAPPC9Q96Q05 1148 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 TBL1YQ9BQ87 522 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 PITPNM3Q9BZ71 974 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 OSBPL8Q9BZF1 889 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 TSPY26PQ9H489 355 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 TFB2MQ9H5Q4 396 aaKnown RBP14.38□□□□□ -0.11
RPS28-201ENST00000417088 ACTR5Q9H9F9 607 aaPredicted RBP14.38□□□□□ -0.11
RPS28-201ENST00000417088 ZDHHC3Q9NYG2 299 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 MAP4K5Q9Y4K4 846 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 NOTCH2Q04721 2471 aa14.38□□□□□ -0.11
RPS28-201ENST00000417088 NBPF19A0A087WUL8 3843 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 TRBV5-4A0A0C4DH59 114 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 MACROD2A1Z1Q3 448 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 IFRD1O00458 451 aaPredicted RBP14.37□□□□□ -0.11
RPS28-201ENST00000417088 STK10O94804 968 aaKnown RBP14.37□□□□□ -0.11
RPS28-201ENST00000417088 TMEM63AO94886 807 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 PVRP15151 417 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 CYP2A7P20853 494 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 MC4RP32245 332 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 PTPN7P35236 360 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 CD151P48509 253 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 ITGA1P56199 1179 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 SKOR2Q2VWA4 1001 aaPredicted RBP14.37□□□□□ -0.11
RPS28-201ENST00000417088 PTCHD3Q3KNS1 767 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 GPR33Q49SQ1 333 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 FAM198BQ6UWH4 519 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 KLHDC8BQ8IXV7 354 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 SYTL1Q8IYJ3 562 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 CCDC170Q8IYT3 715 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 ZBTB2Q8N680 514 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 DNAJC1Q96KC8 554 aaKnown RBP14.37□□□□□ -0.11
RPS28-201ENST00000417088 KLHL25Q9H0H3 589 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 XKR8Q9H6D3 395 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 MVB12BQ9H7P6 319 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 LRRC4CQ9HCJ2 640 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 SERTAD3Q9UJW9 196 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 ZNF451Q9Y4E5 1061 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 PCDHGB7Q9Y5F8 929 aa14.37□□□□□ -0.11
RPS28-201ENST00000417088 SHANK1Q9Y566 2161 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 RCCD1A6NED2 376 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 H7C0S8 307 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 PRSS56P0CW18 603 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 CTNNA2P26232 953 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 ACRV1P26436 265 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 VAV2P52735 878 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 RPA4Q13156 261 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 PRKG2Q13237 762 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 BOP1Q14137 746 aaKnown RBP14.36□□□□□ -0.11
RPS28-201ENST00000417088 SPA17Q15506 151 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 ZRANB3Q5FWF4 1079 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 AADACL2Q6P093 401 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 SARM1Q6SZW1 724 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 SERPINA9Q86WD7 417 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 AMIGO1Q86WK6 493 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 ADGRF3Q8IZF5 1079 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 CLDN19Q8N6F1 224 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 FDCSPQ8NFU4 85 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 TFGQ92734 400 aaPredicted RBP14.36□□□□□ -0.11
RPS28-201ENST00000417088 PPP1R2P1Q96PQ5 205 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 NUDT9Q9BW91 350 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 FEZ2Q9UHY8 353 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms