RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 GPR33Q49SQ1 333 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 PLEKHS1Q5SXH7 462 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 DENND5AQ6IQ26 1287 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 ZNF449Q6P9G9 518 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 DSELQ8IZU8 1212 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 ENDOVQ8N8Q3 282 aaKnown RBP14.02□□□□□ -0.17
PAF1-202ENST00000416728 TRIM5Q9C035 493 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 OR52A5Q9H2C5 316 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 ARNT2Q9HBZ2 717 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 ZDHHC3Q9NYG2 299 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 VPS4AQ9UN37 437 aa14.02□□□□□ -0.17
PAF1-202ENST00000416728 COL12A1Q99715 3063 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 TMEM150CB9EJG8 249 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 BTN3A1O00481 513 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 LDB2O43679 373 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 ZNF189O75820 626 aaPredicted RBP14.01□□□□□ -0.17
PAF1-202ENST00000416728 TJP3O95049 919 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 PRDX3P30048 256 aaKnown RBP14.01□□□□□ -0.17
PAF1-202ENST00000416728 NAP1L1P55209 391 aaKnown RBP14.01□□□□□ -0.17
PAF1-202ENST00000416728 RWDD2BP57060 319 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 SPARCL1Q14515 664 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 ZRANB3Q5FWF4 1079 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 SARM1Q6SZW1 724 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 OR52E1Q8NGJ3 308 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 OR1L3Q8NH93 324 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 CPT1CQ8TCG5 803 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 ADAMTS17Q8TE56 1095 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 DNAJC1Q96KC8 554 aaKnown RBP14.01□□□□□ -0.17
PAF1-202ENST00000416728 CALR3Q96L12 384 aaKnown RBP14.01□□□□□ -0.17
PAF1-202ENST00000416728 HGH1Q9BTY7 390 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 NLNQ9BYT8 704 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 PITPNM3Q9BZ71 974 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 SLC7A5P2Q9GIP4 190 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 MVB12BQ9H7P6 319 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 ACTR5Q9H9F9 607 aaPredicted RBP14.01□□□□□ -0.17
PAF1-202ENST00000416728 MLXIPLQ9NP71 852 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 PCMTD2Q9NV79 361 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 SERTAD3Q9UJW9 196 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 TCFL5Q9UL49 500 aa14.01□□□□□ -0.17
PAF1-202ENST00000416728 G3BP2Q9UN86 482 aaKnown RBP14.01□□□□□ -0.17
PAF1-202ENST00000416728 LRRK2Q5S007 2527 aa14□□□□□ -0.17
PAF1-202ENST00000416728 IGLV3-16A0A075B6K0 115 aa14□□□□□ -0.17
PAF1-202ENST00000416728 C2orf74A8MZ97 194 aa14□□□□□ -0.17
PAF1-202ENST00000416728 BTN3A3O00478 584 aa14□□□□□ -0.17
PAF1-202ENST00000416728 TMEM63AO94886 807 aa14□□□□□ -0.17
PAF1-202ENST00000416728 IPO7O95373 1038 aaKnown RBP14□□□□□ -0.17
PAF1-202ENST00000416728 MSL3P1P0C860 447 aa14□□□□□ -0.17
PAF1-202ENST00000416728 ST6GAL1P15907 406 aa14□□□□□ -0.17
PAF1-202ENST00000416728 ACRV1P26436 265 aa14□□□□□ -0.17
PAF1-202ENST00000416728 RORAP35398 523 aa14□□□□□ -0.17
PAF1-202ENST00000416728 CD151P48509 253 aa14□□□□□ -0.17
PAF1-202ENST00000416728 LMAN1P49257 510 aa14□□□□□ -0.17
PAF1-202ENST00000416728 CDKN1CP49918 316 aaPredicted RBP14□□□□□ -0.17
PAF1-202ENST00000416728 RPA4Q13156 261 aa14□□□□□ -0.17
PAF1-202ENST00000416728 NADK2Q4G0N4 442 aa14□□□□□ -0.17
PAF1-202ENST00000416728 ZNF789Q5FWF6 425 aa14□□□□□ -0.17
PAF1-202ENST00000416728 PAPD7Q5XG87 772 aaKnown RBP14□□□□□ -0.17
PAF1-202ENST00000416728 LCN10Q6JVE6 187 aa14□□□□□ -0.17
PAF1-202ENST00000416728 TAS2R42Q7RTR8 314 aa14□□□□□ -0.17
PAF1-202ENST00000416728 SERPINA9Q86WD7 417 aa14□□□□□ -0.17
PAF1-202ENST00000416728 AMIGO1Q86WK6 493 aa14□□□□□ -0.17
PAF1-202ENST00000416728 SYTL1Q8IYJ3 562 aa14□□□□□ -0.17
PAF1-202ENST00000416728 PHC3Q8NDX5 983 aa14□□□□□ -0.17
PAF1-202ENST00000416728 TFB2MQ9H5Q4 396 aaKnown RBP14□□□□□ -0.17
PAF1-202ENST00000416728 TRBV5-4A0A0C4DH59 114 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 BLACEA4D250 179 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 RCCD1A6NED2 376 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 E7EQ34 232 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 H7C0S8 307 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 GSTM1P09488 218 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 PVRP15151 417 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 PDHA2P29803 388 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 UQCRFS1P47985 274 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 VAV2P52735 878 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 ITGA1P56199 1179 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 GSTM4Q03013 218 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 PRKG2Q13237 762 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 PTCHD3Q3KNS1 767 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 ZNF658BQ4V348 819 aaPredicted RBP13.99□□□□□ -0.17
PAF1-202ENST00000416728 FAM198BQ6UWH4 519 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 ARHGEF18Q6ZSZ5 1173 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 HOOK3Q86VS8 718 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 CLDN19Q8N6F1 224 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 GALNT11Q8NCW6 608 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 TFGQ92734 400 aaPredicted RBP13.99□□□□□ -0.17
PAF1-202ENST00000416728 PSMG3-AS1Q96PY0 264 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 TRAPPC9Q96Q05 1148 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 NRTNQ99748 197 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 KLHL25Q9H0H3 589 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 XKR8Q9H6D3 395 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 NLE1Q9NVX2 485 aaPredicted RBP13.99□□□□□ -0.17
PAF1-202ENST00000416728 ACTR10Q9NZ32 417 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 ZNF451Q9Y4E5 1061 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 PCDHGB7Q9Y5F8 929 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 EPN1Q9Y6I3 576 aaPredicted RBP13.99□□□□□ -0.17
PAF1-202ENST00000416728 FLNCQ14315 2725 aa13.99□□□□□ -0.17
PAF1-202ENST00000416728 SOWAHDA6NJG2 315 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 C9J4A7 227 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 CEACAM4O75871 244 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 PTMAP06454 111 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms