RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 FAM189BP81408 668 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 PMP22Q01453 160 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 LIPEQ05469 1076 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.25□□□□□ -0.93
SNHG3-201ENST00000413987 ADGRE1Q14246 886 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 BAK1Q16611 211 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 MEP1BQ16820 701 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 TFDP3Q5H9I0 405 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 NOMO2Q5JPE7 1267 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 RALGPS1Q5JS13 557 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 INTS6LQ5JSJ4 861 aaKnown RBP9.25□□□□□ -0.93
SNHG3-201ENST00000413987 KLHL17Q6TDP4 642 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 TAS2R42Q7RTR8 314 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 ZC3H7AQ8IWR0 971 aaKnown RBP9.25□□□□□ -0.93
SNHG3-201ENST00000413987 SLC15A3Q8IY34 581 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 ADGRF2Q8IZF7 708 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 DEFB107AQ8IZN7 70 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 LRRC52Q8N7C0 313 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 DNAAF3Q8N9W5 541 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 TSPAN14Q8NG11 270 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 SLC35B2Q8TB61 432 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 BORCS5Q969J3 196 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 TMEM176AQ96HP8 235 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 C11orf70Q9BRQ4 267 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 COQ10BQ9H8M1 238 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 PARVAQ9NVD7 372 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 MBD2Q9UBB5 411 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 PRPF19Q9UMS4 504 aaKnown RBP9.25□□□□□ -0.93
SNHG3-201ENST00000413987 HIF3AQ9Y2N7 669 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 TDRKHQ9Y2W6 561 aaKnown RBP9.25□□□□□ -0.93
SNHG3-201ENST00000413987 PCDHB7Q9Y5E2 793 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 PRUNE2Q8WUY3 3088 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 TRANK1O15050 2925 aa9.25□□□□□ -0.93
SNHG3-201ENST00000413987 MICAL3Q7RTP6 2002 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 hCG_1818297A0A087WSY0 165 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 TARM1B6A8C7 271 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 TRIM49D1C9J1S8 452 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 ANGPT2O15123 496 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 ST8SIA5O15466 376 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 BANF1O75531 89 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 DXOO77932 396 aaKnown RBP9.24□□□□□ -0.93
SNHG3-201ENST00000413987 IL1AP01583 271 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 BPGMP07738 259 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 GALTP07902 379 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 ITGA5P08648 1049 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 NUP62P37198 522 aaPredicted RBP9.24□□□□□ -0.93
SNHG3-201ENST00000413987 PNLIPRP1P54315 467 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 RPS3AP61247 264 aaKnown RBP9.24□□□□□ -0.93
SNHG3-201ENST00000413987 NAA20P61599 178 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 OTUD4Q01804 1114 aaKnown RBP9.24□□□□□ -0.93
SNHG3-201ENST00000413987 IL24Q13007 206 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 C16orf72Q14CZ0 275 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 GPR68Q15743 365 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 AANATQ16613 207 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 MSS51Q4VC12 460 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 CEP78Q5JTW2 689 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 PPP1R26Q5T8A7 1209 aaPredicted RBP9.24□□□□□ -0.93
SNHG3-201ENST00000413987 PLEKHA7Q6IQ23 1121 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 PTCRAQ6ISU1 281 aaPredicted RBP9.24□□□□□ -0.93
SNHG3-201ENST00000413987 TMEM53Q6P2H8 277 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 CYP20A1Q6UW02 462 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 MFSD7Q6UXD7 560 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 TICAM1Q8IUC6 712 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 WDTC1Q8N5D0 677 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 BVESQ8NE79 360 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 FEZF2Q8TBJ5 459 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 SETD6Q8TBK2 473 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 PIWIL2Q8TC59 973 aaKnown RBP9.24□□□□□ -0.93
SNHG3-201ENST00000413987 DLG3Q92796 817 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 CCDC124Q96CT7 223 aaKnown RBP9.24□□□□□ -0.93
SNHG3-201ENST00000413987 SENP8Q96LD8 212 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 ZNF560Q96MR9 790 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 RAD9AQ99638 391 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 TMEM121Q9BTD3 319 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 FTHL17Q9BXU8 183 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 FRMD8Q9BZ67 464 aaPredicted RBP9.24□□□□□ -0.93
SNHG3-201ENST00000413987 ZNF518BQ9C0D4 1074 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 MUC13Q9H3R2 512 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 PRDM6Q9NQX0 595 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 SLC38A7Q9NVC3 462 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 TMEM161AQ9NX61 479 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 REV1Q9UBZ9 1251 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 KIAA1257Q9ULG3 409 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 GPC6Q9Y625 555 aaPredicted RBP9.24□□□□□ -0.93
SNHG3-201ENST00000413987 SERTM2A0A1B0GWG4 89 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 TCRBV9S1A1TA0A576 114 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 CLDN5O00501 218 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 PIP5K1BO14986 540 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 ESRRBO95718 433 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 PTBP3O95758 552 aaKnown RBP9.24□□□□□ -0.93
SNHG3-201ENST00000413987 TIMP1P01033 207 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 THRAP10827 490 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 PSMC3P17980 439 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 ITGAXP20702 1163 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 PTAFRP25105 342 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 ADORA2BP29275 332 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 CRHR1P34998 444 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 BMPR1AP36894 532 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 SSTP61278 116 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 ESRRGP62508 458 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms