RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 PDHA2P29803 388 aa23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 LMAN1P49257 510 aa23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 PRKAA1Q13131 559 aa23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 SPARCL1Q14515 664 aa23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 KRT33BQ14525 404 aa23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 PTCHD3Q3KNS1 767 aa23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 ANKRD20A2Q5SQ80 823 aa23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 ANKRD20A1Q5TYW2 823 aa23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 ANKRD20A3Q5VUR7 823 aa23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 SYTL1Q8IYJ3 562 aa23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 ACTL9Q8TC94 416 aa23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 DCUN1D1Q96GG9 259 aa23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 RBM41Q96IZ5 413 aaKnown RBP23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 FERD3LQ96RJ6 166 aa23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 PITPNM3Q9BZ71 974 aa23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 COG4Q9H9E3 785 aa23.65■■□□□ 1.38
AC005540.1-201ENST00000413911 SEC16AO15027 2179 aa23.64■■□□□ 1.38
AC005540.1-201ENST00000413911 AKR1B15C9JRZ8 316 aaPredicted RBP23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 AGFG2O95081 481 aa23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 PYGMP11217 842 aa23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 ATP1B2P14415 290 aaPredicted RBP23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 PREPP48147 710 aa23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 OTUD4Q01804 1114 aaKnown RBP23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 FHL5Q5TD97 284 aa23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 ITPRIPL1Q6GPH6 555 aa23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 JMJD6Q6NYC1 403 aaPredicted RBP23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 TRAPPC9Q96Q05 1148 aa23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 COPS8Q99627 209 aa23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 ANP32EQ9BTT0 268 aa23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 MFRPQ9BY79 579 aa23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 XKR8Q9H6D3 395 aa23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 ACTR5Q9H9F9 607 aaPredicted RBP23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 HEBP2Q9Y5Z4 205 aa23.64■■□□□ 1.37
AC005540.1-201ENST00000413911 C17orf113A0A1B0GUU1 675 aa23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 A6NL46 340 aa23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 ZNF185O15231 689 aa23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 LDB2O43679 373 aa23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 MSL3P1P0C860 447 aa23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 INPP5JQ15735 1006 aaPredicted RBP23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 ZNF385CQ66K41 422 aaPredicted RBP23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 C11orf63Q6NUN7 778 aa23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 SNX20Q7Z614 316 aa23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 CNGA4Q8IV77 575 aa23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 RBMXL3Q8N7X1 1067 aaKnown RBP23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 OR52E1Q8NGJ3 308 aa23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 CCDC110Q8TBZ0 833 aa23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 ULK4Q96C45 1275 aa23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 TFB2MQ9H5Q4 396 aaKnown RBP23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 FANCEQ9HB96 536 aa23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 PLEKHB1Q9UF11 243 aaPredicted RBP23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 ZNF451Q9Y4E5 1061 aa23.63■■□□□ 1.37
AC005540.1-201ENST00000413911 IGLV3-16A0A075B6K0 115 aa23.62■■□□□ 1.37
AC005540.1-201ENST00000413911 MATN2O00339 956 aa23.62■■□□□ 1.37
AC005540.1-201ENST00000413911 CRTAMO95727 393 aa23.62■■□□□ 1.37
AC005540.1-201ENST00000413911 RALBP11234 206 aa23.62■■□□□ 1.37
AC005540.1-201ENST00000413911 CYP2A7P20853 494 aa23.62■■□□□ 1.37
AC005540.1-201ENST00000413911 VAV2P52735 878 aa23.62■■□□□ 1.37
AC005540.1-201ENST00000413911 ATP1A4Q13733 1029 aa23.62■■□□□ 1.37
AC005540.1-201ENST00000413911 CDHR3Q6ZTQ4 885 aa23.62■■□□□ 1.37
AC005540.1-201ENST00000413911 ADGRF3Q8IZF5 1079 aa23.62■■□□□ 1.37
AC005540.1-201ENST00000413911 TC2NQ8N9U0 490 aa23.62■■□□□ 1.37
AC005540.1-201ENST00000413911 DNAJC1Q96KC8 554 aaKnown RBP23.62■■□□□ 1.37
AC005540.1-201ENST00000413911 AAR2Q9Y312 384 aaKnown RBP23.62■■□□□ 1.37
AC005540.1-201ENST00000413911 PCDHA13Q9Y5I0 950 aa23.62■■□□□ 1.37
AC005540.1-201ENST00000413911 ESPL1Q14674 2120 aa23.62■■□□□ 1.37
AC005540.1-201ENST00000413911 TRBV5-4A0A0C4DH59 114 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 TCP11X1B4DZS4 312 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 KCNN4O15554 427 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 HCRTR1O43613 425 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 ITGALP20701 1170 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 MC4RP32245 332 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 PRKG2Q13237 762 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 NCF4Q15080 339 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 AADACL2Q6P093 401 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 CLDN19Q8N6F1 224 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 GLIS1Q8NBF1 620 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 TBL1YQ9BQ87 522 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 ARNT2Q9HBZ2 717 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 SYTL2Q9HCH5 934 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 FAM60AQ9NP50 221 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 ZDHHC3Q9NYG2 299 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 PCDHGB7Q9Y5F8 929 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 FER1L5A0AVI2 2057 aa23.61■■□□□ 1.37
AC005540.1-201ENST00000413911 H3BMH7 237 aa23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 PJA2O43164 708 aa23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 ZNF749O43361 778 aa23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 CTSBP07858 339 aa23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 RBP3P10745 1247 aa23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 EIF3EP60228 445 aaKnown RBP23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 MRPL49Q13405 166 aaKnown RBP23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 RAPSNQ13702 412 aa23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 BOP1Q14137 746 aaKnown RBP23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 CCDC181Q5TID7 509 aa23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 SLC6A19Q695T7 634 aa23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 SERPINA9Q86WD7 417 aa23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 AMIGO1Q86WK6 493 aa23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 TMEM151BQ8IW70 566 aa23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 KLHDC8BQ8IXV7 354 aa23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 RNF214Q8ND24 703 aa23.6■■□□□ 1.37
AC005540.1-201ENST00000413911 SPATA13Q96N96 652 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms