RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 MVB12BQ9H7P6 319 aa14.42□□□□□ -0.1
LIMS4-201ENST00000413601 UBA6A0AVT1 1052 aaPredicted RBP14.41□□□□□ -0.1
LIMS4-201ENST00000413601 BHMG1C9JSJ3 638 aaPredicted RBP14.41□□□□□ -0.1
LIMS4-201ENST00000413601 F8W8V4 182 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 HAX1O00165 279 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 PRMT5O14744 637 aaPredicted RBP14.41□□□□□ -0.1
LIMS4-201ENST00000413601 ATXN8OSP0DMR3 200 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 MLNP12872 115 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 NELFEP18615 380 aaKnown RBP14.41□□□□□ -0.1
LIMS4-201ENST00000413601 ACADLP28330 430 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 CCR7P32248 378 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 MANEAQ5SRI9 462 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 KRT222Q8N1A0 295 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 NAT8LQ8N9F0 302 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 OR52E1Q8NGJ3 308 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 OR5AR1Q8NGP9 310 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 NKD1Q969G9 470 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 RNF31Q96EP0 1072 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 SERPINB12Q96P63 405 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 OR6C1Q96RD1 312 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 NAPGQ99747 312 aaPredicted RBP14.41□□□□□ -0.1
LIMS4-201ENST00000413601 ZPBPQ9BS86 351 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 CARD6Q9BX69 1037 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 SPRY4Q9C004 299 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 XAB2Q9HCS7 855 aaKnown RBP14.41□□□□□ -0.1
LIMS4-201ENST00000413601 SAMD15Q9P1V8 674 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 SEMA5BQ9P283 1151 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 ASF1AQ9Y294 204 aa14.41□□□□□ -0.1
LIMS4-201ENST00000413601 TEX51A0A1B0GUA7 166 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 TLCD2A6NGC4 264 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 SDR42E2A6NKP2 422 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 K7ENP7 123 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 NDUFS3O75489 264 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 KPNA2P52292 529 aaKnown RBP14.4□□□□□ -0.1
LIMS4-201ENST00000413601 PLOD1Q02809 727 aaPredicted RBP14.4□□□□□ -0.1
LIMS4-201ENST00000413601 HSPA14Q0VDF9 509 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 PRKAA1Q13131 559 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 KCNAB1Q14722 419 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 PTRHD1Q6GMV3 140 aaKnown RBP14.4□□□□□ -0.1
LIMS4-201ENST00000413601 INO80CQ6PI98 192 aaPredicted RBP14.4□□□□□ -0.1
LIMS4-201ENST00000413601 FBXO38Q6PIJ6 1188 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 CREG2Q8IUH2 290 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 VRK3Q8IV63 474 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 PPIL6Q8IXY8 311 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 SIDT2Q8NBJ9 832 aaKnown RBP14.4□□□□□ -0.1
LIMS4-201ENST00000413601 SNRNP27Q8WVK2 155 aaKnown RBP14.4□□□□□ -0.1
LIMS4-201ENST00000413601 UBXN4Q92575 508 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 ELMO2Q96JJ3 720 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 SLC41A2Q96JW4 573 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 PPM1MQ96MI6 270 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 BBC3Q96PG8 261 aaPredicted RBP14.4□□□□□ -0.1
LIMS4-201ENST00000413601 CD180Q99467 661 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 TSSK1BQ9BXA7 367 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 P2RY12Q9H244 342 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 TFB2MQ9H5Q4 396 aaKnown RBP14.4□□□□□ -0.1
LIMS4-201ENST00000413601 XKR8Q9H6D3 395 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 IL1RAPL1Q9NZN1 696 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 ASIC3Q9UHC3 531 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 PCYOX1Q9UHG3 505 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 PILRAQ9UKJ1 303 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 SAR1BQ9Y6B6 198 aa14.4□□□□□ -0.1
LIMS4-201ENST00000413601 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.4□□□□□ -0.1
LIMS4-201ENST00000413601 FAM237BA0A1B0GVD1 139 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 MAGEB16A2A368 324 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 GSAPA4D1B5 854 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 CTAGE9A4FU28 777 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 BTN3A3O00478 584 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 BTN3A1O00481 513 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 FANCGO15287 622 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 RAD1O60671 282 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 STK17BO94768 372 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 FOLR1P15328 257 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 PAMP19021 973 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 WT1P19544 449 aaPredicted RBP14.39□□□□□ -0.11
LIMS4-201ENST00000413601 AOAHP28039 575 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 PTGIRP43119 386 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 MAGEA3P43357 314 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 ATP1A2P50993 1020 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 EIF3BP55884 814 aaKnown RBP14.39□□□□□ -0.11
LIMS4-201ENST00000413601 DHX34Q14147 1143 aaKnown RBP14.39□□□□□ -0.11
LIMS4-201ENST00000413601 IL11RAQ14626 422 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 ANKRD20A4Q4UJ75 823 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 SOWAHCQ53LP3 525 aaPredicted RBP14.39□□□□□ -0.11
LIMS4-201ENST00000413601 RNASEH2BQ5TBB1 312 aaKnown RBP14.39□□□□□ -0.11
LIMS4-201ENST00000413601 ARMC3Q5W041 872 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 KIAA0930Q6ICG6 404 aaPredicted RBP14.39□□□□□ -0.11
LIMS4-201ENST00000413601 MRNIPQ6NTE8 343 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 TIPARPQ7Z3E1 657 aaKnown RBP14.39□□□□□ -0.11
LIMS4-201ENST00000413601 SDCCAG8Q86SQ7 713 aaPredicted RBP14.39□□□□□ -0.11
LIMS4-201ENST00000413601 AMIGO1Q86WK6 493 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 KLHL7Q8IXQ5 586 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 SLC22A15Q8IZD6 547 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 CACNA2D3Q8IZS8 1091 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 AGGF1Q8N302 714 aaeCLIP14.39□□□□□ -0.11
LIMS4-201ENST00000413601 IL22RA1Q8N6P7 574 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 ASZ1Q8WWH4 475 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 SLCO2A1Q92959 643 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 ZNF669Q96BR6 464 aaPredicted RBP14.39□□□□□ -0.11
LIMS4-201ENST00000413601 TRIT1Q9H3H1 467 aaKnown RBP14.39□□□□□ -0.11
LIMS4-201ENST00000413601 GNPTGQ9UJJ9 305 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms