RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 SRMSQ9H3Y6 488 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 FANCEQ9HB96 536 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 ARFGAP3Q9NP61 516 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 ENAMQ9NRM1 1142 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 IMP3Q9NV31 184 aaKnown RBP6.23□□□□□ -1.41
USP54-202ENST00000413442 INTS7Q9NVH2 962 aaKnown RBP6.23□□□□□ -1.41
USP54-202ENST00000413442 SCHIP1Q9P0W5 487 aaPredicted RBP6.23□□□□□ -1.41
USP54-202ENST00000413442 PISDQ9UG56 409 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 CORO1CQ9ULV4 474 aaPredicted RBP6.23□□□□□ -1.41
USP54-202ENST00000413442 BTRCQ9Y297 605 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 WDR37Q9Y2I8 494 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 PCDHB3Q9Y5E6 796 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 PCYT1BQ9Y5K3 369 aaPredicted RBP6.23□□□□□ -1.41
USP54-202ENST00000413442 ACACAQ13085 2346 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 KIF26BQ2KJY2 2108 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 A0A1W2PNU3 283 aaPredicted RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 FAM187AA6NFU0 413 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 OR52A4PA6NMU1 304 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 EFCAB7A8K855 629 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 C21orf140B9A014 251 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 C9orf172C9J069 976 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 F5H423 210 aaPredicted RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 KIF2AO00139 706 aaPredicted RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 DNALI1O14645 258 aaPredicted RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 RASSF9O75901 435 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 VAPBO95292 243 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 KLK3P07288 261 aaPredicted RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 ZSCAN5DPP0CG00 497 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 ENO3P13929 434 aaPredicted RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 ETS1P14921 441 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 HRH2P25021 359 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 MAGEA3P43357 314 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 ARCN1P48444 511 aaKnown RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 ARSDP51689 593 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 MAPK10P53779 464 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 DRG2P55039 364 aaKnown RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 SESN2P58004 480 aaPredicted RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 ETF1P62495 437 aaKnown RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 TUBB4BP68371 445 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 CAV1Q03135 178 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 RELAQ04206 551 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 THOC5Q13769 683 aaKnown RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 PTPRCAPQ14761 206 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 ARHGAP19Q14CB8 494 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 TCEA2Q15560 299 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 LONRF1Q17RB8 773 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 COL28A1Q2UY09 1125 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 ANKRD20A4Q4UJ75 823 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 SYTL3Q4VX76 610 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 DNTTIP2Q5QJE6 756 aaKnown RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 NKAIN2Q5VXU1 208 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 FOXR1Q6PIV2 292 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 FAM83HQ6ZRV2 1179 aaPredicted RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 CEP128Q6ZU80 1094 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 ZNF534Q76KX8 674 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 DET1Q7L5Y6 550 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 OTOAQ7RTW8 1153 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 TMPRSS9Q7Z410 1059 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 CAND1Q86VP6 1230 aaKnown RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 CREG2Q8IUH2 290 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 IL22RA1Q8N6P7 574 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 GPATCH11Q8N954 259 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 GLIS1Q8NBF1 620 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 FBXO15Q8NCQ5 510 aaPredicted RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 HMGCLL1Q8TB92 370 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 CPT1BQ92523 772 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 ANKRD7Q92527 254 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 ART4Q93070 314 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 NKD1Q969G9 470 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 TCTN2Q96GX1 697 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 SLC45A3Q96JT2 553 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 SIGLEC10Q96LC7 697 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 FAM167BQ9BTA0 163 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 PITPNM3Q9BZ71 974 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 PHACTR1Q9C0D0 580 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 TSPYL1Q9H0U9 437 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 CCDC68Q9H2F9 335 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 ADNPQ9H2P0 1102 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 FAM96AQ9H5X1 160 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 CAAP1Q9H8G2 361 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 FAM114A2Q9NRY5 505 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 TRMT1Q9NXH9 659 aaKnown RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 SIDT1Q9NXL6 827 aaKnown RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 NSMCE4AQ9NXX6 385 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 UTP6Q9NYH9 597 aaKnown RBP6.22□□□□□ -1.41
USP54-202ENST00000413442 IL1RAPL1Q9NZN1 696 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 OGFRQ9NZT2 677 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 LNPEPQ9UIQ6 1025 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 TUBD1Q9UJT1 453 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 PILRAQ9UKJ1 303 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 RARRES3Q9UL19 164 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 PADI1Q9ULC6 663 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 PSMD13Q9UNM6 376 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 ASF1AQ9Y294 204 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 PCDHGA6Q9Y5G7 932 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 AP1M2Q9Y6Q5 423 aa6.22□□□□□ -1.41
USP54-202ENST00000413442 AKAP13Q12802 2813 aa6.21□□□□□ -1.41
USP54-202ENST00000413442 PRAMEF33A0A0G2JMD5 474 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 PIPSLA2A3N6 862 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 CCDC78A2IDD5 438 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms