RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SYT6Q5T7P8 510 aaPredicted RBP17.32■□□□□ 0.36
SDCBP-202ENST00000413219 ATG9BQ674R7 924 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 GOLGA7Q7Z5G4 137 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 OR4F6Q8NGB9 312 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 DYNC2LI1Q8TCX1 351 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 MCOLN3Q8TDD5 553 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 SLC10A4Q96EP9 437 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 RPRD1AQ96P16 312 aaPredicted RBP17.32■□□□□ 0.36
SDCBP-202ENST00000413219 ZNF300Q96RE9 604 aaPredicted RBP17.32■□□□□ 0.36
SDCBP-202ENST00000413219 SCHIP1Q9P0W5 487 aaPredicted RBP17.32■□□□□ 0.36
SDCBP-202ENST00000413219 ZNF232Q9UNY5 417 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 ERVW-1Q9UQF0 538 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 CCL27Q9Y4X3 112 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 ARIH1Q9Y4X5 557 aaPredicted RBP17.32■□□□□ 0.36
SDCBP-202ENST00000413219 FAM220BPB1ANY3 271 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 OR7A17O14581 309 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 RECQL5O94762 991 aaPredicted RBP17.32■□□□□ 0.36
SDCBP-202ENST00000413219 POMCP01189 267 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 IL6P05231 212 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 BMP4P12644 408 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 OR1E1P30953 314 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 HUNKP57058 714 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 EFEMP1Q12805 493 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 ANKRD34AQ69YU3 496 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 TMEM179BQ7Z7N9 219 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 ADCK1Q86TW2 530 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 P2RY8Q86VZ1 359 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 MSRB3Q8IXL7 192 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 DCBLD1Q8N8Z6 715 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 HASPINQ8TF76 798 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 FRS2Q8WU20 508 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 C8orf48Q96LL4 319 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 CORO1BQ9BR76 489 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 GABARAPL1Q9H0R8 117 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 RMND5AQ9H871 391 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 UTS2RQ9UKP6 389 aa17.32■□□□□ 0.36
SDCBP-202ENST00000413219 PLXNA3P51805 1871 aa17.31■□□□□ 0.36
SDCBP-202ENST00000413219 CREG1O75629 220 aa17.31■□□□□ 0.36
SDCBP-202ENST00000413219 ZNF865P0CJ78 1059 aaPredicted RBP17.31■□□□□ 0.36
SDCBP-202ENST00000413219 IL5RAQ01344 420 aa17.31■□□□□ 0.36
SDCBP-202ENST00000413219 MVKQ03426 396 aa17.31■□□□□ 0.36
SDCBP-202ENST00000413219 CACNB2Q08289 660 aaPredicted RBP17.31■□□□□ 0.36
SDCBP-202ENST00000413219 GTF2H2Q13888 395 aa17.31■□□□□ 0.36
SDCBP-202ENST00000413219 KEAP1Q14145 624 aa17.31■□□□□ 0.36
SDCBP-202ENST00000413219 ABRAXAS2Q15018 415 aa17.31■□□□□ 0.36
SDCBP-202ENST00000413219 GTF2H2CQ6P1K8 395 aa17.31■□□□□ 0.36
SDCBP-202ENST00000413219 NDNFQ8TB73 568 aa17.31■□□□□ 0.36
SDCBP-202ENST00000413219 GLMNQ92990 594 aa17.31■□□□□ 0.36
SDCBP-202ENST00000413219 AP5M1Q9H0R1 490 aa17.31■□□□□ 0.36
SDCBP-202ENST00000413219 OLA1Q9NTK5 396 aaKnown RBP17.31■□□□□ 0.36
SDCBP-202ENST00000413219 ASIC5Q9NY37 505 aa17.31■□□□□ 0.36
SDCBP-202ENST00000413219 ANKMY1Q9P2S6 941 aa17.31■□□□□ 0.36
SDCBP-202ENST00000413219 PCDHB8Q9UN66 801 aa17.31■□□□□ 0.36
SDCBP-202ENST00000413219 PCDHGA10Q9Y5H3 936 aa17.31■□□□□ 0.36
SDCBP-202ENST00000413219 TOR1BO14657 336 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 AXIN1O15169 862 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 RGS14O43566 566 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 SLC2A4P14672 509 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 LPOP22079 712 aaPredicted RBP17.3■□□□□ 0.36
SDCBP-202ENST00000413219 ARL1P40616 181 aaPredicted RBP17.3■□□□□ 0.36
SDCBP-202ENST00000413219 SLC35A2P78381 396 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 RAPSNQ13702 412 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 PAGE2BQ5JRK9 111 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 SHQ1Q6PI26 577 aaKnown RBP17.3■□□□□ 0.36
SDCBP-202ENST00000413219 ADAMTSL2Q86TH1 951 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 CIR1Q86X95 450 aaPredicted RBP17.3■□□□□ 0.36
SDCBP-202ENST00000413219 CALHM3Q86XJ0 350 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 LACC1Q8IV20 430 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 PLPP6Q8IY26 295 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 PIANPQ8IYJ0 282 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 LGI2Q8N0V4 545 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 SVOPQ8N4V2 548 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 MDGA1Q8NFP4 955 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 CEP295NLQ96MC4 621 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 IKZF5Q9H5V7 419 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 SCN3BQ9NY72 215 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 SLC25A37Q9NYZ2 338 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 EVLQ9UI08 416 aaPredicted RBP17.3■□□□□ 0.36
SDCBP-202ENST00000413219 INVSQ9Y283 1065 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 Q9Y3F1 56 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 TRBV5-3A0A0A0MS03 114 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 SLC28A1O00337 649 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 PRMT5O14744 637 aaPredicted RBP17.3■□□□□ 0.36
SDCBP-202ENST00000413219 GPR182O15218 404 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 XPNPEP2O43895 674 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 ESR1P03372 595 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 PRKACGP22612 351 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 CDKN1CP49918 316 aaPredicted RBP17.3■□□□□ 0.36
SDCBP-202ENST00000413219 BEX3Q00994 111 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 PLIN5Q00G26 463 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 CDC20Q12834 499 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 TRAF3Q13114 568 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 NPTX1Q15818 432 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 FAM174BQ3ZCQ3 159 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 SLC39A12Q504Y0 691 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 CAPN13Q6MZZ7 669 aaPredicted RBP17.3■□□□□ 0.36
SDCBP-202ENST00000413219 PSAPL1Q6NUJ1 521 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 LRRC8DQ7L1W4 858 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 HOMEZQ8IX15 550 aa17.3■□□□□ 0.36
SDCBP-202ENST00000413219 CHPFQ8IZ52 775 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms