RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 MR1Q95460 341 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 PPM1MQ96MI6 270 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 IFT27Q9BW83 186 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 TCF7L1Q9HCS4 588 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 FBXL12Q9NXK8 326 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF224Q9NZL3 707 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 PADI3Q9ULW8 664 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 DHRS12A0PJE2 317 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 MAFO75444 373 aaPredicted RBP11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 SEMA3DO95025 777 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 PGLSO95336 258 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 CBLP22681 906 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 MATKP42679 507 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 RHBDL3P58872 404 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 GAD2Q05329 585 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 PRKCDQ05655 676 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 LDLRAP1Q5SW96 308 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 NYAP1Q6ZVC0 841 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 CAND1Q86VP6 1230 aaKnown RBP11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 OXR1Q8N573 874 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 TRPV1Q8NER1 839 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 CCDC120Q96HB5 630 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 FAM84AQ96KN4 292 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 B3GALT6Q96L58 329 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 DUSP9Q99956 384 aaKnown RBP11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 PEAK1Q9H792 1746 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 HCKP08631 526 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 ARPC4P59998 168 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 FKBP1AP62942 108 aaKnown RBP11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 MXD1Q05195 221 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 SMARCB1Q12824 385 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 CDKL4Q5MAI5 379 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 PRSS55Q6UWB4 352 aaPredicted RBP11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 OTOP3Q7RTS5 596 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 SPERTQ8NA61 448 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 HMCESQ96FZ2 354 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 ZSWIM3Q96MP5 696 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 CDT1Q9H211 546 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 NOL11Q9H8H0 719 aaKnown RBP11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 AP5Z1O43299 807 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 SYNGR4O95473 234 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 NFKB2Q00653 900 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 LRRC32Q14392 662 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 LCN1P1Q5VSP4 162 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 GTF2IRD2BQ6EKJ0 949 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 GTF2IRD2Q86UP8 949 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 ATAD1Q8NBU5 361 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 C11orf84Q9BUA3 381 aaPredicted RBP11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 TMEM131LA2VDJ0 1609 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 OAZ2O95190 189 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 CCR8P51685 355 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 ADARP55265 1226 aaKnown RBP11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 CACNG1Q06432 222 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 MTX3Q5HYI7 312 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF101Q8IZC7 436 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF565Q8N9K5 539 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 SRFBP1Q8NEF9 429 aaKnown RBP11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 TMEM121BQ9BXQ6 578 aaPredicted RBP11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 AZIN1O14977 448 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 NME6O75414 186 aaPredicted RBP11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 RPP40O75818 363 aaKnown RBP11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 ERBB2P04626 1255 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 UROSP10746 265 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 ADH5P11766 374 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 SLC25A3Q00325 362 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 EOGTQ5NDL2 527 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 CDKAL1Q5VV42 579 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 NLGN4XQ8N0W4 816 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 COQ8AQ8NI60 647 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 SLC39A3Q9BRY0 314 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 B3GNT5Q9BYG0 378 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 ALG2Q9H553 416 aa11.07□□□□□ -0.64
PRPF40A-202ENST00000410080 A0A0J9YYE9 177 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 FADS2P1A8MWK0 482 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 FUT4P22083 530 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 RPS9P46781 194 aaKnown RBP11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 AP3S2P59780 193 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 CDK18Q07002 472 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 BNIP2Q12982 314 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF234Q14588 700 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 RGS21Q2M5E4 152 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 C5orf22Q49AR2 442 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 NPAS4Q8IUM7 802 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 KATNAL2Q8IYT4 538 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 KBTBD8Q8NFY9 601 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 NINJ1Q92982 152 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 RFKQ969G6 155 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 MMABQ96EY8 250 aaPredicted RBP11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 SCLYQ96I15 445 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 NSMCE3Q96MG7 304 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 E7EQ34 232 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 CYP11A1P05108 521 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 HOXB8P17481 243 aaPredicted RBP11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 TYRP1P17643 537 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 POLR2JP52435 117 aaKnown RBP11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 SLC25A52Q3SY17 297 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 VPS26BQ4G0F5 336 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 GKN2Q86XP6 184 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 LPIN3Q9BQK8 851 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF541Q9H0D2 1346 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms