RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 VPS37BQ9H9H4 285 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 TBC1D17Q9HA65 648 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 CD93Q9NPY3 652 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 PPANQ9NQ55 473 aaKnown RBP4.79□□□□□ -1.64
LSM5-205ENST00000409952 CYSLTR2Q9NS75 346 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 CENPMQ9NSP4 180 aa4.79□□□□□ -1.64
LSM5-205ENST00000409952 FEZF1A0PJY2 475 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 CTAGE9A4FU28 777 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 MAGEA13PA6NCF6 341 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 TMEM191CA6NGB0 347 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 DUXAA6NLW8 204 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 LINC00473A8K010 186 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 TMEM110-MUSTN1A8MSY1 372 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 H0YGN5 161 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 H7C1Q1 480 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 KLHL41O60662 606 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 RAD51DO75771 328 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 NDUFB4O95168 129 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 TOP3BO95985 862 aaKnown RBP4.78□□□□□ -1.64
LSM5-205ENST00000409952 EGR2P11161 476 aaPredicted RBP4.78□□□□□ -1.64
LSM5-205ENST00000409952 G6PDP11413 515 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 CD22P20273 847 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 MAOAP21397 527 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 TACR3P29371 465 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 HOXA7P31268 230 aaPredicted RBP4.78□□□□□ -1.64
LSM5-205ENST00000409952 DCTDP32321 178 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 PITPNBP48739 271 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 RGS7P49802 495 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 CCT8P50990 548 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 FOLH1Q04609 750 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 CETN1Q12798 172 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 TSTA3Q13630 321 aaPredicted RBP4.78□□□□□ -1.64
LSM5-205ENST00000409952 CEBPEQ15744 281 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 RABL6Q3YEC7 729 aaPredicted RBP4.78□□□□□ -1.64
LSM5-205ENST00000409952 TIGD2Q4W5G0 525 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 BOLA3Q53S33 107 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 TAF1BQ53T94 588 aaPredicted RBP4.78□□□□□ -1.64
LSM5-205ENST00000409952 ZDHHC20Q5W0Z9 365 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 NSUN5P2Q63ZY6 315 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 KCTD11Q693B1 232 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 RAET1GQ6H3X3 334 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 OR6B2Q6IFH4 312 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 PRR27Q6MZM9 219 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 ARMCX2Q7L311 632 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 PEG10Q86TG7 708 aaKnown RBP4.78□□□□□ -1.64
LSM5-205ENST00000409952 SFTPA2Q8IWL1 248 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 RASGEF1CQ8N431 466 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 OR52K2Q8NGK3 314 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 PROKR1Q8TCW9 393 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 CAVIN3Q969G5 261 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 MOB3AQ96BX8 217 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 SGF29Q96ES7 293 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 CFAP36Q96G28 342 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 CFAP53Q96M91 514 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 Q96MF0 132 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 SFXN2Q96NB2 322 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 CARD6Q9BX69 1037 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 TM2D2Q9BX73 214 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 ACPTQ9BZG2 426 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 RAB17Q9H0T7 212 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 ESRP2Q9H6T0 727 aaKnown RBP4.78□□□□□ -1.64
LSM5-205ENST00000409952 PPP1R3EQ9H7J1 279 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 FAM212BQ9NTI7 297 aaPredicted RBP4.78□□□□□ -1.64
LSM5-205ENST00000409952 SYBUQ9NX95 663 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 ACSL5Q9ULC5 683 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 RNF150Q9ULK6 438 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 GPR132Q9UNW8 380 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 RAP2CQ9Y3L5 183 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 TMEM184BQ9Y519 407 aaPredicted RBP4.78□□□□□ -1.64
LSM5-205ENST00000409952 KDRP35968 1356 aa4.78□□□□□ -1.64
LSM5-205ENST00000409952 A0A1B0GWJ7 208 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 FAM90A10PA6NDY2 464 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 FOXO6A8MYZ6 492 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 F8WDY8 70 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 HSPB6O14558 160 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 MEIS2O14770 477 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 ATP9AO75110 1047 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 ATG13O75143 517 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 OR6B1O95007 311 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 LUC7L3O95232 432 aaKnown RBP4.77□□□□□ -1.65
LSM5-205ENST00000409952 ACSL3O95573 720 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 CXCL14O95715 111 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 KRT6BP04259 564 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 CBSLP0DN79 551 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 DDX5P17844 614 aaKnown RBP4.77□□□□□ -1.65
LSM5-205ENST00000409952 NR1D1P20393 614 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 CBSP35520 551 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 SOX6P35712 828 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 GRIA3P42263 894 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 KRT6CP48668 564 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 RAD23BP54727 409 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 SRP54P61011 504 aaKnown RBP4.77□□□□□ -1.65
LSM5-205ENST00000409952 DLK1P80370 383 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 GALK2Q01415 458 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 CFHR1Q03591 330 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 EGR4Q05215 589 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 CHIT1Q13231 466 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 RIPK1Q13546 671 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 PDE7AQ13946 482 aa4.77□□□□□ -1.65
LSM5-205ENST00000409952 SHROOM1Q2M3G4 852 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms