RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 CD244Q9BZW8 370 aa13.8□□□□□ -0.2
LIMS2-206ENST00000409754 ZCCHC2Q9C0B9 1178 aaKnown RBP13.8□□□□□ -0.2
LIMS2-206ENST00000409754 TUBB1Q9H4B7 451 aa13.8□□□□□ -0.2
LIMS2-206ENST00000409754 C8orf33Q9H7E9 229 aaPredicted RBP13.8□□□□□ -0.2
LIMS2-206ENST00000409754 NOL11Q9H8H0 719 aaKnown RBP13.8□□□□□ -0.2
LIMS2-206ENST00000409754 PARVBQ9HBI1 364 aa13.8□□□□□ -0.2
LIMS2-206ENST00000409754 PFDN4Q9NQP4 134 aa13.8□□□□□ -0.2
LIMS2-206ENST00000409754 WWOXQ9NZC7 414 aa13.8□□□□□ -0.2
LIMS2-206ENST00000409754 LOC100653049A0A140TA62 436 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 KANSL1LA0AUZ9 987 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 OR2AG2A6NM03 316 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 K7EQS6 105 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 ATG13O75143 517 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 KRT34O76011 436 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 SLCO2B1O94956 709 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 ADH1BP00325 375 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 ANXA5P08758 320 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 KIR2DL1P43626 348 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-206ENST00000409754 HSPA7P48741 367 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 RPIAP49247 311 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 RAP1GDS1P52306 607 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 CYLC2Q14093 348 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-206ENST00000409754 UBE2R2Q712K3 238 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-206ENST00000409754 RASGRP3Q8IV61 690 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 VRK3Q8IV63 474 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 DDIASQ8IXT1 998 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 TCAIMQ8N3R3 496 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 TMEM105Q8N8V8 129 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 PJA1Q8NG27 643 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 FAM3CQ92520 227 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 MARK4Q96L34 752 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 AKTIPQ9H8T0 292 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 C2orf42Q9NWW7 574 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 PDE10AQ9Y233 779 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 MEI4A8MW99 385 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 GFYI3L273 518 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 OR7A17O14581 309 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 INPP4BO15327 924 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 TSPAN6O43657 245 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 AP1G1O43747 822 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 TM7SF2O76062 418 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 OTCP00480 354 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 EGFP01133 1207 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 CHRNB1P11230 501 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 C5AR1P21730 350 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 DRD3P35462 400 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 GGT5P36269 586 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 GPR1P46091 355 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 PIK3CGP48736 1102 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 CTSCP53634 463 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 ERVPABLB-1P60509 514 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 IRX1P78414 480 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-206ENST00000409754 CUL3Q13618 768 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 CST6Q15828 149 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 BCL7AQ4VC05 210 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 FAM219BQ5XKK7 198 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 RAET1GQ6H3X3 334 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 Q6ZS52 159 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 BMP8AQ7Z5Y6 402 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 SNX32Q86XE0 403 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 HOMEZQ8IX15 550 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 BEND7Q8N7W2 519 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-206ENST00000409754 OR52B6Q8NGF0 335 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 CCM2Q9BSQ5 444 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 OPTCQ9UBM4 332 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 BAIAP2L1Q9UHR4 511 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 NDRG2Q9UN36 371 aaKnown RBP13.79□□□□□ -0.2
LIMS2-206ENST00000409754 TIMM22Q9Y584 194 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 ST14Q9Y5Y6 855 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 CACNA1IQ9P0X4 2223 aa13.79□□□□□ -0.2
LIMS2-206ENST00000409754 DMDP11532 3685 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 MYO15AQ9UKN7 3530 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 CKAP5Q14008 2032 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 LRRK1Q38SD2 2015 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 ATP6AP2A0A1C7CYW4 349 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 K7EPI3 171 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 MID1O15344 667 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 SYNCRIPO60506 623 aaKnown RBP13.78□□□□□ -0.2
LIMS2-206ENST00000409754 CCNT2O60583 730 aaKnown RBP13.78□□□□□ -0.2
LIMS2-206ENST00000409754 ATP6AP2O75787 350 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 OR4F21O95013 312 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 HIST1H2AGP0C0S8 130 aaPredicted RBP13.78□□□□□ -0.2
LIMS2-206ENST00000409754 LBPP18428 481 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 HIST1H2ADP20671 130 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 ITGAXP20702 1163 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 CYP2A7P20853 494 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 WASP42768 502 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 AP1S2P56377 157 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 SLC25A3Q00325 362 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 PTK2BQ14289 1009 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 MAPRE2Q15555 327 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 ZRSR2Q15696 482 aaKnown RBP13.78□□□□□ -0.2
LIMS2-206ENST00000409754 SYTL3Q4VX76 610 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 XKR7Q5GH72 579 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 LETMD1Q6P1Q0 360 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 TMEM220Q6QAJ8 160 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 SCUBE1Q8IWY4 988 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 AADATQ8N5Z0 425 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 FLCNQ8NFG4 579 aa13.78□□□□□ -0.2
LIMS2-206ENST00000409754 SKA2Q8WVK7 121 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms