RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 AOAHP28039 575 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 ADARP55265 1226 aaKnown RBP30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 PPP1CAP62136 330 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 CKAP4Q07065 602 aaKnown RBP30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 HSPA14Q0VDF9 509 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 ZNF789Q5FWF6 425 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 VRK3Q8IV63 474 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 DENND6AQ8IWF6 608 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 SLC22A15Q8IZD6 547 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 UNC5BQ8IZJ1 945 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 PHC3Q8NDX5 983 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 ACVR1CQ8NER5 493 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 ASZ1Q8WWH4 475 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 C9orf72Q96LT7 481 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 WDR83Q9BRX9 315 aaKnown RBP30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 ERP44Q9BS26 406 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 NAT9Q9BTE0 207 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 EPHA6Q9UF33 1036 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 CRYL1Q9Y2S2 319 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 SNRNP200O75643 2136 aaKnown RBP30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 AHCTF1Q8WYP5 2266 aa30.35■■■□□ 2.45
TRAF3IP1-203ENST00000409739 ZFHX4Q86UP3 3567 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 GPC4O75487 556 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 TTC4O95801 387 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 S1PR4O95977 384 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 ANKRD34CP0C6C1 535 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 FMO4P31512 558 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 SLC1A2P43004 574 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 MAPK10P53779 464 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 PCBP4P57723 403 aaKnown RBP30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 CTBP1Q13363 440 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 IRGCQ6NXR0 463 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 KLHL35Q6PF15 583 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 KCNMB4Q86W47 210 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 HGH1Q9BTY7 390 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 DPH5Q9H2P9 285 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 VPS9D1Q9Y2B5 631 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 LAMA5O15230 3695 aa30.34■■■□□ 2.45
TRAF3IP1-203ENST00000409739 DSPP15924 2871 aaKnown RBP30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 OR5K3A6NET4 321 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 NDC80O14777 642 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 ESR1P03372 595 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 APOA4P06727 396 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 FGF3P11487 239 aaPredicted RBP30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 ELK3P41970 407 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 ARL4CP56559 192 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 TMED2Q15363 201 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 SPANXN3Q5MJ09 141 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 HP1BP3Q5SSJ5 553 aaPredicted RBP30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 LMNTD2Q8IXW0 634 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 OR5AR1Q8NGP9 310 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 CALML6Q8TD86 181 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 ZNF592Q92610 1267 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 DCBLD2Q96PD2 775 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 PLAC1Q9HBJ0 212 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 OCIAD1Q9NX40 245 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 CHMP2BQ9UQN3 213 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 ASF1AQ9Y294 204 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 PCDHGA7Q9Y5G6 932 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 TEX264Q9Y6I9 313 aa30.33■■■□□ 2.45
TRAF3IP1-203ENST00000409739 NIPSNAP2O75323 286 aa30.32■■■□□ 2.44
TRAF3IP1-203ENST00000409739 EIF2S3P41091 472 aaKnown RBP30.32■■■□□ 2.44
TRAF3IP1-203ENST00000409739 HSP90AA5PQ58FG0 334 aa30.32■■■□□ 2.44
TRAF3IP1-203ENST00000409739 FAM92BQ6ZTR7 304 aa30.32■■■□□ 2.44
TRAF3IP1-203ENST00000409739 OOSP2Q86WS3 158 aa30.32■■■□□ 2.44
TRAF3IP1-203ENST00000409739 BBOF1Q8ND07 529 aa30.32■■■□□ 2.44
TRAF3IP1-203ENST00000409739 OR52E1Q8NGJ3 308 aa30.32■■■□□ 2.44
TRAF3IP1-203ENST00000409739 LRRC39Q96DD0 335 aa30.32■■■□□ 2.44
TRAF3IP1-203ENST00000409739 ZDHHC12Q96GR4 267 aa30.32■■■□□ 2.44
TRAF3IP1-203ENST00000409739 FAM167BQ9BTA0 163 aa30.32■■■□□ 2.44
TRAF3IP1-203ENST00000409739 FBXO6Q9NRD1 293 aaPredicted RBP30.32■■■□□ 2.44
TRAF3IP1-203ENST00000409739 WHRNQ9P202 907 aa30.32■■■□□ 2.44
TRAF3IP1-203ENST00000409739 EFCAB7A8K855 629 aa30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 H3BMM5 538 aa30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 SLCO2B1O94956 709 aa30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 SLC5A2P31639 672 aa30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 PRKG2Q13237 762 aa30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 WHAMMP3Q1A5X7 153 aa30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 DUPD1Q68J44 220 aa30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 PRSS42Q7Z5A4 293 aa30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 FAM129CQ86XR2 697 aa30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 BMPERQ8N8U9 685 aa30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 LCN9Q8WX39 176 aa30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 USP7Q93009 1102 aa30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 CFAP36Q96G28 342 aa30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 NRTNQ99748 197 aa30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 IARS2Q9NSE4 1012 aaKnown RBP30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 HRASLS2Q9NWW9 162 aa30.31■■■□□ 2.44
TRAF3IP1-203ENST00000409739 OR6C74A6NCV1 312 aa30.3■■■□□ 2.44
TRAF3IP1-203ENST00000409739 TOX3O15405 576 aaPredicted RBP30.3■■■□□ 2.44
TRAF3IP1-203ENST00000409739 KIF1CO43896 1103 aaKnown RBP30.3■■■□□ 2.44
TRAF3IP1-203ENST00000409739 PRAMEF10O60809 474 aa30.3■■■□□ 2.44
TRAF3IP1-203ENST00000409739 RASSF9O75901 435 aa30.3■■■□□ 2.44
TRAF3IP1-203ENST00000409739 PKMP14618 531 aaKnown RBP30.3■■■□□ 2.44
TRAF3IP1-203ENST00000409739 UNC5AQ6ZN44 842 aa30.3■■■□□ 2.44
TRAF3IP1-203ENST00000409739 OTOAQ7RTW8 1153 aa30.3■■■□□ 2.44
TRAF3IP1-203ENST00000409739 TBC1D21Q8IYX1 336 aa30.3■■■□□ 2.44
TRAF3IP1-203ENST00000409739 OR4E2Q8NGC2 313 aa30.3■■■□□ 2.44
TRAF3IP1-203ENST00000409739 OR5K2Q8NHB8 316 aa30.3■■■□□ 2.44
TRAF3IP1-203ENST00000409739 PMEPA1Q969W9 287 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms