RNA–Protein interactions for RNA: ENST00000409649.5

IMP4-202, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-202ENST00000409649 CDX4O14627 284 aaPredicted RBP16.27■□□□□ 0.2
IMP4-202ENST00000409649 FFAR2O15552 330 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 PHGDHO43175 533 aaKnown RBP16.27■□□□□ 0.2
IMP4-202ENST00000409649 ATP8B1O43520 1251 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 ZBTB14O43829 449 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 OPA1O60313 960 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 WISP3O95389 354 aaPredicted RBP16.27■□□□□ 0.2
IMP4-202ENST00000409649 CATP04040 527 aaKnown RBP16.27■□□□□ 0.2
IMP4-202ENST00000409649 CELA2BP08218 269 aaPredicted RBP16.27■□□□□ 0.2
IMP4-202ENST00000409649 SLC35E2BP0CK96 405 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 MTHFD1P11586 935 aaKnown RBP16.27■□□□□ 0.2
IMP4-202ENST00000409649 ACADLP28330 430 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 PDHA2P29803 388 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 CSRP3P50461 194 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 DUSP3P51452 185 aaPredicted RBP16.27■□□□□ 0.2
IMP4-202ENST00000409649 LIMK1P53667 647 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 RPE65Q16518 533 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 ASCL5Q7RTU5 278 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 CMC1Q7Z7K0 106 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 GATAD2AQ86YP4 633 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 SFRP1Q8N474 314 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 RAB42Q8N4Z0 105 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 LILRA3Q8N6C8 439 aaPredicted RBP16.27■□□□□ 0.2
IMP4-202ENST00000409649 PHC3Q8NDX5 983 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 EEF1AKMT1Q8WVE0 214 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 ALKBH8Q96BT7 664 aaKnown RBP16.27■□□□□ 0.2
IMP4-202ENST00000409649 UBXN10Q96LJ8 280 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 C12orf66Q96MD2 445 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 SLC30A3Q99726 388 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 TRIM54Q9BYV2 358 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.27■□□□□ 0.2
IMP4-202ENST00000409649 VPS11Q9H270 941 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 TRIT1Q9H3H1 467 aaKnown RBP16.27■□□□□ 0.2
IMP4-202ENST00000409649 CTNNAL1Q9UBT7 734 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 PSMD13Q9UNM6 376 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 ASF1AQ9Y294 204 aa16.27■□□□□ 0.2
IMP4-202ENST00000409649 RFPL1O75677 317 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 MATN4O95460 622 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 VIPP01282 170 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 GSTA1P08263 222 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 ENO2P09104 434 aaPredicted RBP16.26■□□□□ 0.19
IMP4-202ENST00000409649 LTA4HP09960 611 aaKnown RBP16.26■□□□□ 0.19
IMP4-202ENST00000409649 CCDC166P0CW27 439 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 BRAFP15056 766 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 CYP2A7P20853 494 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 MAP4P27816 1152 aaKnown RBP16.26■□□□□ 0.19
IMP4-202ENST00000409649 FASLGP48023 281 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 CCT5P48643 541 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 TCEA2Q15560 299 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 C14orf28Q4W4Y0 310 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 XKR5Q6UX68 686 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 NAPRTQ6XQN6 538 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 ADAMTSL2Q86TH1 951 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 C17orf82Q86X59 251 aaPredicted RBP16.26■□□□□ 0.19
IMP4-202ENST00000409649 TBC1D21Q8IYX1 336 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 NAGSQ8N159 534 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 FBXO15Q8NCQ5 510 aaPredicted RBP16.26■□□□□ 0.19
IMP4-202ENST00000409649 GPR156Q8NFN8 814 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 OR2I1PQ8NGU4 316 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 MZB1Q8WU39 189 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 ASB11Q8WXH4 323 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 RMDN2Q96LZ7 410 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 IMP3Q9NV31 184 aaKnown RBP16.26■□□□□ 0.19
IMP4-202ENST00000409649 CPNE7Q9UBL6 633 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 DCDC2Q9UHG0 476 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 WDR37Q9Y2I8 494 aa16.26■□□□□ 0.19
IMP4-202ENST00000409649 PIKFYVEQ9Y2I7 2098 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 MAP2K7O14733 419 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 GFRA3O60609 400 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 PSIP1O75475 530 aaKnown RBP16.25■□□□□ 0.19
IMP4-202ENST00000409649 KLHL2O95198 593 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 TSPAN12O95859 305 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 HIST1H2AGP0C0S8 130 aaPredicted RBP16.25■□□□□ 0.19
IMP4-202ENST00000409649 GIMD1P0DJR0 217 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 HIST1H2ADP20671 130 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 ABRQ12979 859 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 ZNF460Q14592 562 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 CLCA4Q14CN2 919 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 ACAP2Q15057 778 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 NR0B2Q15466 257 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 CYHR1Q6ZMK1 362 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 TRABD2AQ86V40 505 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 VRK3Q8IV63 474 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 DCUN1D3Q8IWE4 304 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 OR5K2Q8NHB8 316 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 MCOLN3Q8TDD5 553 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 NAT6Q93015 286 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 RAD51AP1Q96B01 352 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 HIST1H2AHQ96KK5 128 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 SMC6Q96SB8 1091 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 INSM2Q96T92 566 aaPredicted RBP16.25■□□□□ 0.19
IMP4-202ENST00000409649 CDC6Q99741 560 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 HIST1H2AJQ99878 128 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 H2AFJQ9BTM1 129 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 CENPHQ9H3R5 247 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 UCK1Q9HA47 277 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 NOVA2Q9UNW9 492 aaKnown RBP16.25■□□□□ 0.19
IMP4-202ENST00000409649 ACTL7BQ9Y614 415 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 OTOGLQ3ZCN5 2332 aa16.25■□□□□ 0.19
IMP4-202ENST00000409649 KNL1Q8NG31 2342 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms