RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 DKK1O94907 266 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 SLCO2B1O94956 709 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 ALPPL2P10696 532 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 ZNF37AP17032 561 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 ACTR1BP42025 376 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 MAGEA12P43365 314 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 IL2P60568 153 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 ACTR1AP61163 376 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 PAQR3Q6TCH7 311 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 TAF8Q7Z7C8 310 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 CMC1Q7Z7K0 106 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 TBC1D1Q86TI0 1168 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 PIM3Q86V86 326 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 ZNF548Q8NEK5 533 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 GIMAP7Q8NHV1 300 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 LMX1AQ8TE12 382 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 DUSP23Q9BVJ7 150 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 NLGN3Q9NZ94 848 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 SENP1Q9P0U3 644 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 GALPQ9UBC7 116 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 GULP1Q9UBP9 304 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 ANGPTL2Q9UKU9 493 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 DOLKQ9UPQ8 538 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 WASF3Q9UPY6 502 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 ACOT9Q9Y305 439 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 A0A096LPK6 155 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 FFAR2O15552 330 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 PHGDHO43175 533 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 SLC35G4P0C7Q5 338 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 SLC35E2BP0CK96 405 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 SLC2A4P14672 509 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 CKMT2P17540 419 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 MAPK9P45984 424 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 GBX1Q14549 363 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 PROX2Q3B8N5 592 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 SLC30A9Q6PML9 568 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 LVRNQ6Q4G3 990 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 WASH2PQ6VEQ5 465 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 NEK10Q6ZWH5 1172 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 RAB44Q7Z6P3 723 aaPredicted RBP16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 SLC22A15Q8IZD6 547 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 CYP4X1Q8N118 509 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 CHCHD4Q8N4Q1 142 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 MZB1Q8WU39 189 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 TSNARE1Q96NA8 513 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 SLC30A3Q99726 388 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 WASH6PQ9NQA3 447 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 ZNF446Q9NWS9 450 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 PLEKHM1Q9Y4G2 1056 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 PCDHGA1Q9Y5H4 931 aa16.16■□□□□ 0.18
TSPAN4-208ENST00000409531 ANKRD12Q6UB98 2062 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 PRR19A6NJB7 356 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 PDZK1P1A8MUH7 402 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 LMO7DNF2Z398 122 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 IFRD1O00458 451 aaPredicted RBP16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 RFPL1O75677 317 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 TOP3BO95985 862 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 C2P06681 752 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 ANXA6P08133 673 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 MPC1LP0DKB6 136 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 CDK4P11802 303 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 COL6A2P12110 1019 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 AK4P27144 223 aaPredicted RBP16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 HALP42357 657 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 CSRP3P50461 194 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 C1orf61Q13536 156 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 ZNF460Q14592 562 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 AGAP9Q5VTM2 703 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 NAPRTQ6XQN6 538 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 FAM83HQ6ZRV2 1179 aaPredicted RBP16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 TRABD2AQ86V40 505 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 LCA5Q86VQ0 697 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 NRROSQ86YC3 692 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 CPNE9Q8IYJ1 553 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 MYO1HQ8N1T3 1032 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 FAM181AQ8N9Y4 354 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 PDLIM5Q96HC4 596 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 FOPNLQ96NB1 174 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 SCNM1Q9BWG6 230 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 VPS11Q9H270 941 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 TMBIM4Q9HC24 238 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 CDYLQ9Y232 598 aa16.15■□□□□ 0.18
TSPAN4-208ENST00000409531 COL5A1P20908 1838 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 OR5K4A6NMS3 321 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 AGPSO00116 658 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 HYAL3O43820 417 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 SASH3O75995 380 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 WISP3O95389 354 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 CCDC166P0CW27 439 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 PREPP48147 710 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 FAM83EQ2M2I3 478 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 ACSBG2Q5FVE4 666 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 KLC3Q6P597 504 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 PDZD3Q86UT5 571 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 LILRA3Q8N6C8 439 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 CCL4L1Q8NHW4 92 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 EEF1AKMT1Q8WVE0 214 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 SKA2Q8WVK7 121 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 LINGO1Q96FE5 620 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms