RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 RSBN1Q5VWQ0 802 aaPredicted RBP8.18□□□□□ -1.1
SNX13-201ENST00000409076 PANX1Q96RD7 426 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 PTPN18Q99952 460 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 AARSD1Q9BTE6 412 aaKnown RBP8.18□□□□□ -1.1
SNX13-201ENST00000409076 YIPF2Q9BWQ6 316 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 SEZ6LQ9BYH1 1024 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 ABCB9Q9NP78 766 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 TREX1Q9NSU2 369 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 ACTR3BQ9P1U1 418 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 CKAP5Q14008 2032 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 CACNA1IQ9P0X4 2223 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 ARID2Q68CP9 1835 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 HTTP42858 3142 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 TBKBP1A7MCY6 615 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 TARM1B6A8C7 271 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 RFXAPO00287 272 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 PRRG1O14668 218 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 CKMP06732 381 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 IGFBP5P24593 272 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 CORO1AP31146 461 aaKnown RBP8.18□□□□□ -1.1
SNX13-201ENST00000409076 CRATP43155 626 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 NKX3-2P78367 333 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 PCBP2Q15366 365 aaKnown RBP eCLIP8.18□□□□□ -1.12e-9■■■■■ 41
SNX13-201ENST00000409076 MED22Q15528 200 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 CYBRD1Q53TN4 286 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 CCNYL2Q5T2Q4 361 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 CACHD1Q5VU97 1274 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 KDELC1Q6UW63 502 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 NANOGNBQ7Z5D8 188 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 GOLGA7Q7Z5G4 137 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 PELI3Q8N2H9 469 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 TBC1D15Q8TC07 691 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 LKAAEAR1Q8TD35 194 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.18□□□□□ -1.1
SNX13-201ENST00000409076 FUBP1Q96AE4 644 aaKnown RBP8.18□□□□□ -1.1
SNX13-201ENST00000409076 HOPXQ9BPY8 73 aaPredicted RBP8.18□□□□□ -1.1
SNX13-201ENST00000409076 GPR62Q9BZJ7 368 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 MTG2Q9H4K7 406 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 CAPN10Q9HC96 672 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 PALMDQ9NP74 551 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 MTRRQ9UBK8 725 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 GTF2IRD1Q9UHL9 959 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 BOLA1Q9Y3E2 137 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 C16orf96A6NNT2 1141 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 TOMM70O94826 608 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 F2P00734 622 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 HRH2P25021 359 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 LEPRP48357 1165 aaKnown RBP8.18□□□□□ -1.1
SNX13-201ENST00000409076 HK3P52790 923 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 SMARCB1Q12824 385 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 NPTX1Q15818 432 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 ELMSAN1Q6PJG2 1045 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 BLOC1S3Q6QNY0 202 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 SERPINA9Q86WD7 417 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 ZDHHC21Q8IVQ6 265 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 TMEM86AQ8N2M4 240 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 NETO1Q8TDF5 533 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 KCTD13Q8WZ19 329 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 TMEM203Q969S6 136 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 ZHX1-C8orf76Q96EF9 292 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 IMP4Q96G21 291 aaKnown RBP8.18□□□□□ -1.1
SNX13-201ENST00000409076 HEPHQ9BQS7 1158 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 ANKRD60Q9BZ19 345 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 TMEM161AQ9NX61 479 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 GPRC5BQ9NZH0 403 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 MOSPD1Q9UJG1 213 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 PTCH2Q9Y6C5 1203 aa8.18□□□□□ -1.1
SNX13-201ENST00000409076 OAS3Q9Y6K5 1087 aaKnown RBP8.18□□□□□ -1.1
SNX13-201ENST00000409076 CCDC88CQ9P219 2028 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 HHLA1C9JL84 531 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 RFXANKO14593 260 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 PER2O15055 1255 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 PFDN6O15212 129 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 NDUFS2O75306 463 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 C8BP07358 591 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 SLC10A3P09131 477 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 FAM163BP0C2L3 166 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 MTHFD2P13995 350 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 LPOP22079 712 aaPredicted RBP8.17□□□□□ -1.1
SNX13-201ENST00000409076 TACR1P25103 407 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 STC1P52823 247 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 RAB25P57735 213 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 CYP4F8P98187 520 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 SEMA3BQ13214 749 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 TUSC3Q13454 348 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 RNASE12Q5GAN4 147 aaKnown RBP8.17□□□□□ -1.1
SNX13-201ENST00000409076 TMEM179BQ7Z7N9 219 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 CCDC117Q8IWD4 279 aaPredicted RBP8.17□□□□□ -1.1
SNX13-201ENST00000409076 RBM12BQ8IXT5 1001 aaKnown RBP8.17□□□□□ -1.1
SNX13-201ENST00000409076 TBC1D21Q8IYX1 336 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 CLECL1Q8IZS7 167 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 SLC13A3Q8WWT9 602 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 SCLYQ96I15 445 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 MYRFLQ96LU7 910 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 NFKBIZQ9BYH8 718 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 CRISPLD1Q9H336 500 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 ZDHHC6Q9H6R6 413 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 RMI1Q9H9A7 625 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 RRAGCQ9HB90 399 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 TRIM39Q9HCM9 518 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms