RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 NEMP2A6NFY4 417 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 OR51F1A6NGY5 319 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 UPK3BL1B0FP48 263 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 UPK3BL2E5RIL1 263 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 CASQ2O14958 399 aaPredicted RBP12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 SH3BP5O60239 455 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 SOCS5O75159 536 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 SKAP2O75563 359 aaPredicted RBP12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 PCSK2P16519 638 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 ZNF7P17097 686 aaPredicted RBP12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 LBPP18428 481 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 MC4RP32245 332 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 TIE1P35590 1138 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 RGS4P49798 205 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 LCP2Q13094 533 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 CCNIQ14094 377 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 FLOT2Q14254 428 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 PTK2BQ14289 1009 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 IHHQ14623 411 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 EIF4HQ15056 248 aaKnown RBP12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 RPS6KA2Q15349 733 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 PTPRNQ16849 979 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 AGKQ53H12 422 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 ZRANB3Q5FWF4 1079 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 PIGGQ5H8A4 983 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 COQ5Q5HYK3 327 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 TMEM207Q6UWW9 146 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 LDB1Q86U70 411 aaPredicted RBP12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 HPS6Q86YV9 775 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 PAF1Q8N7H5 531 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 OR56A4Q8NGH8 313 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 CEP76Q8TAP6 659 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 UCMAQ8WVF2 138 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 NRG4Q8WWG1 115 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 SORCS1Q8WY21 1168 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 KCNJ9Q92806 393 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 ALG14Q96F25 216 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 PDLIM5Q96HC4 596 aaKnown RBP12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 PPP1R36Q96LQ0 422 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 BTBD9Q96Q07 612 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 HOPXQ9BPY8 73 aaPredicted RBP12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 OSBPL1AQ9BXW6 950 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 TRIM15Q9C019 465 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 POLMQ9NP87 494 aaPredicted RBP12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 MID1IP1Q9NPA3 183 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 RIC8BQ9NVN3 520 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 PDP2Q9P2J9 529 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 SUCOQ9UBS9 1254 aaKnown RBP12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 CROTQ9UKG9 612 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 PILRBQ9UKJ0 227 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 SARDHQ9UL12 918 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 KIAA1549LQ6ZVL6 1849 aa12.69□□□□□ -0.38
SMARCB1-203ENST00000407082 DYTNA2CJ06 578 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 CFLARO15519 480 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 NRP2O60462 931 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 ZMPSTE24O75844 475 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 BCAS2O75934 225 aaPredicted RBP12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 PDE5AO76074 875 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 IGSF6O95976 241 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 PRLP01236 227 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 PRB1P04280 392 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 FTH1P19P0C7X4 201 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 UROSP10746 265 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 CD59P13987 128 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 IDO1P14902 403 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 RPS3P23396 243 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 DPP6P42658 865 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 CTSOP43234 321 aaPredicted RBP12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 KIR2DL1P43626 348 aaPredicted RBP12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 CCR10P46092 362 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 MRPL19P49406 292 aaKnown RBP12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 PKNOX1P55347 436 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 PSME3P61289 254 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 ARF5P84085 180 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 ECT2LQ008S8 904 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 RPL6Q02878 288 aaKnown RBP12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 CLCQ05315 142 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 BCL2L1Q07817 233 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 C19orf57Q0VDD7 668 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 PFKFB4Q16877 469 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 SAMD4BQ5PRF9 694 aaKnown RBP12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 IRAK1BP1Q5VVH5 260 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 ZDHHC20Q5W0Z9 365 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 METTL2BQ6P1Q9 378 aaKnown RBP12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 PAQR3Q6TCH7 311 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 LARP4Q71RC2 724 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 TAS2R42Q7RTR8 314 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 GPSM1Q86YR5 675 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 MIER2Q8N344 545 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 ZNF513Q8N8E2 541 aaPredicted RBP12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 ICA1LQ8NDH6 482 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 CYB5D2Q8WUJ1 264 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 PTERQ96BW5 349 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 CCDC124Q96CT7 223 aaKnown RBP12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 ZDHHC4Q9NPG8 344 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 NUDT4Q9NZJ9 180 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 GNPTGQ9UJJ9 305 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 FIS1Q9Y3D6 152 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 PCDHGC4Q9Y5F7 938 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 SPO11Q9Y5K1 396 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms