RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 MAGEE1Q9HCI5 957 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 IL26Q9NPH9 171 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 VPS51Q9UID3 782 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 MAGEL2Q9UJ55 1249 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 COMMD10Q9Y6G5 202 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 PGLSO95336 258 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 LDLRP01130 860 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 PCNAP12004 261 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 COL6A1P12109 1028 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 CRHBPP24387 322 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 RPS6KA2Q15349 733 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 ZIK1Q3SY52 487 aaPredicted RBP9.66□□□□□ -0.86
MSH2-202ENST00000406134 ANKRD26P1Q6NSI1 321 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 FAM151BQ6UXP7 276 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 LRRC8DQ7L1W4 858 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 APCDD1Q8J025 514 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 DHRSXQ8N5I4 330 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 ZNF420Q8TAQ5 688 aaPredicted RBP9.66□□□□□ -0.86
MSH2-202ENST00000406134 FNDC8Q8TC99 324 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 ACDQ96AP0 544 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 TTPALQ9BTX7 342 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 IPPKQ9H8X2 491 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 SMURF2Q9HAU4 748 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 CIDEBQ9UHD4 219 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 PCDHB9Q9Y5E1 797 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 PCDHGA8Q9Y5G5 932 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 UNC80Q8N2C7 3258 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 RNF103-CHMP3A0A140T963 221 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 TYW5A2RUC4 315 aaKnown RBP9.65□□□□□ -0.86
MSH2-202ENST00000406134 ITGB6P18564 788 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 PCMT1P22061 227 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 SLC11A2P49281 568 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 HMGCS1Q01581 520 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 GPR162Q16538 588 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 PRR23BQ6ZRT6 265 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 SLC16A12Q6ZSM3 486 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 EFL1Q7Z2Z2 1120 aaKnown RBP9.65□□□□□ -0.86
MSH2-202ENST00000406134 SERPINA9Q86WD7 417 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 FAM217AQ8IXS0 508 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 ADGRG2Q8IZP9 1017 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 OR52E4Q8NGH9 312 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 OR6K2Q8NGY2 324 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 METTL6Q8TCB7 284 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 SNX19Q92543 992 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 DCUN1D5Q9BTE7 237 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 OSBPL10Q9BXB5 764 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 OSBPL6Q9BZF3 934 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 TOR3AQ9H497 397 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 SARS2Q9NP81 518 aaKnown RBP9.65□□□□□ -0.86
MSH2-202ENST00000406134 ASIC5Q9NY37 505 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 NAALAD2Q9Y3Q0 740 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 GMEB1Q9Y692 573 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 PLXND1Q9Y4D7 1925 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 NOTCH4Q99466 2003 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 KRT87PA6NCN2 255 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 E9PQ18 207 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 ABLIM3O94929 683 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 RAP2AP10114 183 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 IRF1P10914 325 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 IL7RP16871 459 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 ACRV1P26436 265 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 ACVR2AP27037 513 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 PLIN5Q00G26 463 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 NFATC2Q13469 925 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 DAG1Q14118 895 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 RUNDC3AQ59EK9 446 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 HABP4Q5JVS0 413 aaKnown RBP9.65□□□□□ -0.86
MSH2-202ENST00000406134 SPANXN4Q5MJ08 99 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 GPR107Q5VW38 600 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 Q6ZNX1 250 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 PHACTR4Q8IZ21 702 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 CNDP2Q96KP4 475 aaKnown RBP9.65□□□□□ -0.86
MSH2-202ENST00000406134 FAM193BQ96PV7 902 aaPredicted RBP9.65□□□□□ -0.86
MSH2-202ENST00000406134 BARD1Q99728 777 aaKnown RBP9.65□□□□□ -0.86
MSH2-202ENST00000406134 CCDC68Q9H2F9 335 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 TMPRSS11EQ9UL52 423 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 PPT2Q9UMR5 302 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 NUP214P35658 2090 aaPredicted RBP9.65□□□□□ -0.86
MSH2-202ENST00000406134 STX7O15400 261 aaKnown RBP9.65□□□□□ -0.86
MSH2-202ENST00000406134 TULP3O75386 442 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 CRCPO75575 148 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 PRAMEF1O95521 474 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 SEMG1P04279 462 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 MBL2P11226 248 aaPredicted RBP9.65□□□□□ -0.86
MSH2-202ENST00000406134 BPIP17213 487 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 GGT5P36269 586 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 CSKP41240 450 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 CDKN2CP42773 168 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 SMARCB1Q12824 385 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 AQP6Q13520 282 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 LRRC23Q53EV4 343 aaPredicted RBP9.65□□□□□ -0.86
MSH2-202ENST00000406134 INO80DQ53TQ3 878 aaPredicted RBP9.65□□□□□ -0.86
MSH2-202ENST00000406134 CCNYL2Q5T2Q4 361 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 HECTD3Q5T447 861 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 ZNF773Q6PK81 442 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 CHDHQ8NE62 594 aaPredicted RBP9.65□□□□□ -0.86
MSH2-202ENST00000406134 SLC13A3Q8WWT9 602 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 ADGRE3Q9BY15 652 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 ACPTQ9BZG2 426 aa9.65□□□□□ -0.86
MSH2-202ENST00000406134 CD244Q9BZW8 370 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms