RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 HECTD3Q5T447 861 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 TMC5Q6UXY8 1006 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 DEPDC4Q8N2C3 294 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 TRPV3Q8NET8 790 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 ASB2Q96Q27 587 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 ALG2Q9H553 416 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 DDX28Q9NUL7 540 aaKnown RBP14.78□□□□□ -0.04
ATG4B-206ENST00000405546 INTS7Q9NVH2 962 aaKnown RBP14.78□□□□□ -0.04
ATG4B-206ENST00000405546 OR6C75A6NL08 312 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 SYN3O14994 580 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 RPLP2P05387 115 aaKnown RBP14.78□□□□□ -0.04
ATG4B-206ENST00000405546 SLC6A2P23975 617 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 PIGAP37287 484 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 GDF5P43026 501 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 DGKQP52824 942 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 CCL23P55773 120 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 NRG1Q02297 640 aaPredicted RBP14.78□□□□□ -0.04
ATG4B-206ENST00000405546 AAK1Q2M2I8 961 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 PAGE3Q5JUK9 113 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 GPRIN3Q6ZVF9 776 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 ANKRD13BQ86YJ7 626 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 SLC22A15Q8IZD6 547 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 OR7A2PQ8NGA2 310 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 OR56A4Q8NGH8 313 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 CNIH3Q8TBE1 160 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 RAB2BQ8WUD1 216 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 FUBP1Q96AE4 644 aaKnown RBP14.78□□□□□ -0.04
ATG4B-206ENST00000405546 DACH2Q96NX9 599 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 HOPXQ9BPY8 73 aaPredicted RBP14.78□□□□□ -0.04
ATG4B-206ENST00000405546 TTPALQ9BTX7 342 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 MAGEH1Q9H213 219 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 ZFP14Q9HCL3 533 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 ERVK-11Q9UQG0 969 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 ASB1Q9Y576 335 aa14.78□□□□□ -0.04
ATG4B-206ENST00000405546 ANKRD66B4E2M5 251 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 CA12O43570 354 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 CAPN1P07384 714 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 SLC2A4P14672 509 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 TTKP33981 857 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 RACK1P63244 317 aaKnown RBP14.77□□□□□ -0.04
ATG4B-206ENST00000405546 GPR17Q13304 367 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 TXNDC11Q6PKC3 985 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 USP43Q70EL4 1123 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 GALNT5Q7Z7M9 940 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 KLHDC8BQ8IXV7 354 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 NKAPQ8N5F7 415 aaKnown RBP14.77□□□□□ -0.04
ATG4B-206ENST00000405546 FBXO22Q8NEZ5 403 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 ROPN1LQ96C74 230 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 UHRF1Q96T88 793 aaPredicted RBP14.77□□□□□ -0.04
ATG4B-206ENST00000405546 THUMPD3Q9BV44 507 aaKnown RBP14.77□□□□□ -0.04
ATG4B-206ENST00000405546 TOR3AQ9H497 397 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 ARMC1Q9NVT9 282 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 ANAPC2Q9UJX6 822 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 TSC2P49815 1807 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 ANKRD34BA5PLL1 514 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 DRGXA6NNA5 263 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 ZNF701M0R085 212 aaPredicted RBP14.77□□□□□ -0.04
ATG4B-206ENST00000405546 HOXD9P28356 352 aaPredicted RBP14.77□□□□□ -0.04
ATG4B-206ENST00000405546 ATN1P54259 1190 aaPredicted RBP14.77□□□□□ -0.04
ATG4B-206ENST00000405546 MTPNP58546 118 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 TIAL1Q01085 375 aaKnown RBP eCLIP14.77□□□□□ -0.044e-6■■□□□ 12.4
ATG4B-206ENST00000405546 MADCAM1Q13477 382 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 INTS11Q5TA45 600 aaKnown RBP14.77□□□□□ -0.04
ATG4B-206ENST00000405546 FAM126BQ8IXS8 530 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 TMBIM1Q969X1 311 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 SCLYQ96I15 445 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 FEM1AQ9BSK4 669 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 TBCDQ9BTW9 1192 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 TRPM5Q9NZQ8 1165 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 SCHIP1Q9P0W5 487 aaPredicted RBP14.77□□□□□ -0.04
ATG4B-206ENST00000405546 FNIP2Q9P278 1114 aa14.77□□□□□ -0.04
ATG4B-206ENST00000405546 IGLV3-10A0A075B6K4 115 aa14.77□□□□□ -0.05
ATG4B-206ENST00000405546 TMEM88BA6NKF7 163 aa14.77□□□□□ -0.05
ATG4B-206ENST00000405546 GNGT2O14610 69 aa14.77□□□□□ -0.05
ATG4B-206ENST00000405546 SNPHO15079 494 aa14.77□□□□□ -0.05
ATG4B-206ENST00000405546 GSTA4O15217 222 aa14.77□□□□□ -0.05
ATG4B-206ENST00000405546 SPNP16150 400 aa14.77□□□□□ -0.05
ATG4B-206ENST00000405546 OGNP20774 298 aaKnown RBP14.77□□□□□ -0.05
ATG4B-206ENST00000405546 RFC2P35250 354 aa14.77□□□□□ -0.05
ATG4B-206ENST00000405546 SLC26A3P40879 764 aa14.77□□□□□ -0.05
ATG4B-206ENST00000405546 TUFMP49411 452 aaKnown RBP14.77□□□□□ -0.05
ATG4B-206ENST00000405546 POLR2JP52435 117 aaKnown RBP14.77□□□□□ -0.05
ATG4B-206ENST00000405546 IFITM2Q01629 132 aa14.77□□□□□ -0.05
ATG4B-206ENST00000405546 COLEC12Q5KU26 742 aa14.77□□□□□ -0.05
ATG4B-206ENST00000405546 SYTL1Q8IYJ3 562 aa14.77□□□□□ -0.05
ATG4B-206ENST00000405546 MYRFLQ96LU7 910 aa14.77□□□□□ -0.05
ATG4B-206ENST00000405546 PSKH2Q96QS6 385 aa14.77□□□□□ -0.05
ATG4B-206ENST00000405546 TRIT1Q9H3H1 467 aaKnown RBP14.77□□□□□ -0.05
ATG4B-206ENST00000405546 SNX5Q9Y5X3 404 aa14.77□□□□□ -0.05
ATG4B-206ENST00000405546 LCHNA4D1U4 455 aa14.76□□□□□ -0.05
ATG4B-206ENST00000405546 TAF4O00268 1085 aa14.76□□□□□ -0.05
ATG4B-206ENST00000405546 TBL1XO60907 577 aa14.76□□□□□ -0.05
ATG4B-206ENST00000405546 FMO3P31513 532 aa14.76□□□□□ -0.05
ATG4B-206ENST00000405546 HSPA7P48741 367 aa14.76□□□□□ -0.05
ATG4B-206ENST00000405546 TTPAP49638 278 aa14.76□□□□□ -0.05
ATG4B-206ENST00000405546 OR4D2P58180 307 aa14.76□□□□□ -0.05
ATG4B-206ENST00000405546 ATP6V0D1P61421 351 aa14.76□□□□□ -0.05
ATG4B-206ENST00000405546 CDH18Q13634 790 aa14.76□□□□□ -0.05
ATG4B-206ENST00000405546 RSBN1Q5VWQ0 802 aaPredicted RBP14.76□□□□□ -0.05
ATG4B-206ENST00000405546 MILR1Q7Z6M3 343 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms