RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 FRMD7Q6ZUT3 714 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 C11orf96Q7Z7L8 435 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CUZD1Q86UP6 607 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 MYLK4Q86YV6 388 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 GALNT13Q8IUC8 556 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 LSMEM2Q8N112 164 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 OR6Y1Q8NGX8 325 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 OR2L2Q8NH16 312 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 MCOLN3Q8TDD5 553 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ASB11Q8WXH4 323 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 TSACCQ96A04 125 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 ATP6V1E2Q96A05 226 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 RMDN2Q96LZ7 410 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 TMEM120AQ9BXJ8 343 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ATG10Q9H0Y0 220 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 MIR1-1HGQ9H1L0 117 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CARS2Q9HA77 564 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 PARVBQ9HBI1 364 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 EML4Q9HC35 981 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 FGF22Q9HCT0 170 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 AASDHPPTQ9NRN7 309 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 NUDT4Q9NZJ9 180 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 KLHL42Q9P2K6 505 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 SUFUQ9UMX1 484 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 GPR34Q9UPC5 381 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 KCNK6Q9Y257 313 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ASF1AQ9Y294 204 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 PLEKHM1Q9Y4G2 1056 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 OARD1Q9Y530 152 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ANGPTL3Q9Y5C1 460 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 TECTAO75443 2155 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 IGHV1OR15-9A0A0B4J2B8 117 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 SLC5A10A0PJK1 596 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 LIN7AO14910 233 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 CHUKO15111 745 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 KMOO15229 486 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 NPHS1O60500 1241 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 SKAP2O75563 359 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 CRCPO75575 148 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 TGDSO95455 350 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 IGHV4-34P06331 123 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 C8GP07360 202 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ANXA5P08758 320 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 HTR1BP28222 390 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ZXDAP98168 799 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 NFKB2Q00653 900 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 RPL6Q02878 288 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 CLCQ05315 142 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 PRKAA1Q13131 559 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ZNF542PQ5EBM4 170 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 TPRG1LQ5T0D9 272 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 KIAA0895LQ68EN5 471 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CLEC6AQ6EIG7 209 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 Q6ZSR6 202 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 PHC3Q8NDX5 983 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 HM13Q8TCT9 377 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 PYCR2Q96C36 320 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 L3HYPDHQ96EM0 354 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 PDXPQ96GD0 296 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 BMFQ96LC9 184 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CDK15Q96Q40 435 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 EBF4Q9BQW3 602 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 HGH1Q9BTY7 390 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 SLC12A9Q9BXP2 914 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 NUF2Q9BZD4 464 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 GSTO2Q9H4Y5 243 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CAAP1Q9H8G2 361 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 KCNK13Q9HB14 408 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 PRM3Q9NNZ6 103 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 TNFRSF12AQ9NP84 129 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 MID1IP1Q9NPA3 183 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 SPATA6Q9NWH7 488 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 RAP2CQ9Y3L5 183 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 SLCO1B1Q9Y6L6 691 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 USH1CQ9Y6N9 552 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 GOLGA8QA0A0J9YX86 632 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 A0A1B0GTL3 188 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 PRSS38A1L453 326 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 GOLGA8OA6NCC3 632 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 PDZK1P1A8MUH7 402 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 ARHGEF33A8MVX0 844 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 GOLGA8NF8WBI6 632 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 EIF3FO00303 357 aaPredicted RBP3.62□□□□□ -1.83
RTN4-208ENST00000404909 IFRD1O00458 451 aaPredicted RBP3.62□□□□□ -1.83
RTN4-208ENST00000404909 UBFD1O14562 309 aaKnown RBP3.62□□□□□ -1.83
RTN4-208ENST00000404909 KATNA1O75449 491 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 CATP04040 527 aaKnown RBP3.62□□□□□ -1.83
RTN4-208ENST00000404909 MPC1LP0DKB6 136 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 ITPKAP23677 461 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 SERPINB3P29508 390 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 CLCNKAP51800 687 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 SH3BP2P78314 561 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 PRKG2Q13237 762 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 GBX1Q14549 363 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 SETDB1Q15047 1291 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 CCSMST1Q4G0I0 132 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 LAYNQ6UX15 382 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 GCNT7Q6ZNI0 430 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 ARMCX6Q7L4S7 300 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 HID1Q8IV36 788 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms