RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PPP3R1P63098 170 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 OR13C4Q8NGS5 318 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 EFHD2Q96C19 240 aaPredicted RBP13.56□□□□□ -0.24
VAPA-202ENST00000400000 LRMDAQ9H2I8 198 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 RNPEPL1Q9HAU8 725 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 MBD2Q9UBB5 411 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 GRIP1Q9Y3R0 1128 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 KDM4FA0A1W2PPD8 638 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 CAPN8A6NHC0 703 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 IL33O95760 270 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 TGFBR2P37173 567 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 KIAA1161Q6NSJ0 714 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 PIWIL4Q7Z3Z4 852 aaKnown RBP13.56□□□□□ -0.24
VAPA-202ENST00000400000 GRASPQ7Z6J2 395 aaPredicted RBP13.56□□□□□ -0.24
VAPA-202ENST00000400000 ZNF781Q8N8C0 355 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 STYXQ8WUJ0 223 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 DIRAS2Q96HU8 199 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 WDR77Q9BQA1 342 aaPredicted RBP13.56□□□□□ -0.24
VAPA-202ENST00000400000 NCANO14594 1321 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 ZSCAN5BA6NJL1 495 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 PDPK1O15530 556 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 UNC5CO95185 931 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 SLC7A1P30825 629 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 RTP1P59025 263 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 TMPRSS11AQ6ZMR5 421 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 FUKQ8N0W3 1084 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 SUN3Q8TAQ9 357 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 NCSTNQ92542 709 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 PCDHB11Q9Y5F2 797 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 E7ENX8 843 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 NME6O75414 186 aaPredicted RBP13.56□□□□□ -0.24
VAPA-202ENST00000400000 C4BPAP04003 597 aaKnown RBP13.56□□□□□ -0.24
VAPA-202ENST00000400000 FMO3P31513 532 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 BDKRB1P46663 353 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 FKBP1AP62942 108 aaKnown RBP13.56□□□□□ -0.24
VAPA-202ENST00000400000 TLE2Q04725 743 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 LIPEQ05469 1076 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 ANO7Q6IWH7 933 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 IRF2BP2Q7Z5L9 587 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 THAP3Q8WTV1 239 aaPredicted RBP13.56□□□□□ -0.24
VAPA-202ENST00000400000 NUS1Q96E22 293 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 DMRTB1Q96MA1 342 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 TTYH2Q9BSA4 534 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 ABI3Q9P2A4 366 aa13.56□□□□□ -0.24
VAPA-202ENST00000400000 GNEQ9Y223 722 aaKnown RBP13.56□□□□□ -0.24
VAPA-202ENST00000400000 CARNS1A5YM72 827 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 HCRTO43612 131 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 CDC123O75794 336 aaPredicted RBP13.55□□□□□ -0.24
VAPA-202ENST00000400000 FGF19O95750 216 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 HLA-EP13747 358 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 ZCCHC12Q6PEW1 402 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 KBTBD8Q8NFY9 601 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 ZFP3Q96NJ6 502 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 MIOSQ9NXC5 875 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 FER1L4A9Z1Z3 1794 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 CYP3A7-CYP3A51PA0A087WV96 503 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 CCDC162PA2VCL2 907 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 BPGMP07738 259 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 CYP3A7P24462 503 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 GKP32189 559 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 SCN1BQ07699 218 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 OLIG2Q13516 323 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 MAPK14Q16539 360 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 OR4C6Q8NH72 309 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 LRRC19Q9H756 370 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 PRDM8Q9NQV8 689 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 HMGXB4Q9UGU5 601 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 RSL24D1Q9UHA3 163 aaKnown RBP13.55□□□□□ -0.24
VAPA-202ENST00000400000 CLCA3PQ9Y6N3 262 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 NDST3O95803 873 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 CAND1Q86VP6 1230 aaKnown RBP13.55□□□□□ -0.24
VAPA-202ENST00000400000 AP3S1Q92572 193 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 SGCDQ92629 289 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 SAMD4AQ9UPU9 718 aaKnown RBP13.55□□□□□ -0.24
VAPA-202ENST00000400000 PCDHGB3Q9Y5G1 929 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 NOX1Q9Y5S8 564 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 MST1RQ04912 1400 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 TTC27Q6P3X3 843 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 TMC8Q8IU68 726 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 MCFD2Q8NI22 146 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 RHOJQ9H4E5 214 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 GIN1Q9NXP7 522 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 ELOVL7A1L3X0 281 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 CPNE3O75131 537 aaKnown RBP13.55□□□□□ -0.24
VAPA-202ENST00000400000 OAZ2O95190 189 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 CH25HO95992 272 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 TARDBPQ13148 414 aaKnown RBP eCLIP13.55□□□□□ -0.241e-10■■■■□ 23.3
VAPA-202ENST00000400000 BBS12Q6ZW61 710 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 HMGN2P46Q86SG4 172 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 PLD5Q8N7P1 536 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 CST11Q9H112 138 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 MRPS17Q9Y2R5 130 aaKnown RBP13.55□□□□□ -0.24
VAPA-202ENST00000400000 WNT6Q9Y6F9 365 aa13.55□□□□□ -0.24
VAPA-202ENST00000400000 A0A1B0GVT2 93 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 SOWAHBA6NEL2 793 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 SNAP91O60641 907 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 DUSP11O75319 330 aaKnown RBP13.54□□□□□ -0.24
VAPA-202ENST00000400000 POP4O95707 220 aaKnown RBP13.54□□□□□ -0.24
VAPA-202ENST00000400000 PRH1P02810 166 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 GRK6P43250 576 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms