RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 LPAL2Q16609 132 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 CAND1Q86VP6 1230 aaKnown RBP7.82□□□□□ -1.16
USP47-203ENST00000399455 VN1R2Q8NFZ6 395 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 PLEKHG4BQ96PX9 1271 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 RNF39Q9H2S5 420 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 MMADHCQ9H3L0 296 aaPredicted RBP7.82□□□□□ -1.16
USP47-203ENST00000399455 RASSF1Q9NS23 344 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 ZNF624Q9P2J8 865 aaPredicted RBP7.82□□□□□ -1.16
USP47-203ENST00000399455 HS3ST4Q9Y661 456 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 FAM227AF5H4B4 570 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 PRAMEF26H0Y7S4 382 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 UROSP10746 265 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 ZNF823P16415 610 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 FOLR3P41439 243 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 PKNOX1P55347 436 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 PLEKHG4Q58EX7 1191 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 HDDC2Q7Z4H3 204 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 DCUN1D3Q8IWE4 304 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 OFCC1Q8IZS5 231 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 TRPV3Q8NET8 790 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 TNFRSF25Q93038 417 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 PELOQ9BRX2 385 aaKnown RBP7.82□□□□□ -1.16
USP47-203ENST00000399455 ACSS2Q9NR19 701 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 PRORSD1PA6NEY8 169 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 RIIAD1A6NNX1 92 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 GPR37L1O60883 481 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 FKBP6O75344 327 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 HSF2Q03933 536 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 SLC8B1Q6J4K2 584 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 UNQ6126/PRO20091Q6UXV3 157 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 DEFB107AQ8IZN7 70 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 MBOAT7Q96N66 472 aa7.82□□□□□ -1.16
USP47-203ENST00000399455 SLC7A4O43246 635 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 CCNA2P20248 432 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 TMED10P49755 219 aaKnown RBP7.81□□□□□ -1.16
USP47-203ENST00000399455 RGS8P57771 180 aaPredicted RBP7.81□□□□□ -1.16
USP47-203ENST00000399455 KLHL4Q9C0H6 718 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 ATG10Q9H0Y0 220 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 ACP6Q9NPH0 428 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 SAMD4AQ9UPU9 718 aaKnown RBP7.81□□□□□ -1.16
USP47-203ENST00000399455 LDB2O43679 373 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 POP7O75817 140 aaKnown RBP7.81□□□□□ -1.16
USP47-203ENST00000399455 ENDOUP21128 410 aaKnown RBP7.81□□□□□ -1.16
USP47-203ENST00000399455 TNK2Q07912 1038 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 DNM1P34Q6PK57 102 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 ANKFN1Q8N957 763 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 OR10Q1Q8NGQ4 319 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 SLC22A8Q8TCC7 542 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 C1orf74Q96LT6 269 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 EFCAB11Q9BUY7 163 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 ELOA3DA6NLF2 546 aaPredicted RBP7.81□□□□□ -1.16
USP47-203ENST00000399455 FESP07332 822 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 ACY1Q03154 408 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 ELOA3BQ3SY89 546 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 LRRC66Q68CR7 880 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 ZBTB49Q6ZSB9 765 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 ZNF280BQ86YH2 543 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 ELOA3Q8NG57 546 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 MRPL38Q96DV4 380 aaKnown RBP7.81□□□□□ -1.16
USP47-203ENST00000399455 SLC47A1Q96FL8 570 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 TGM7Q96PF1 710 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 SORCS3Q9UPU3 1222 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 ARL5AQ9Y689 179 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 CDC7O00311 574 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 MAP2K7O14733 419 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 MYL9P24844 172 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 ABCG1P45844 678 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 HSPB3Q12988 150 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 KCNC3Q14003 757 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 ANKRD54Q6NXT1 300 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 WDR93Q6P2C0 686 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 GPR141Q7Z602 305 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 LRRC34Q8IZ02 419 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 ZNF567Q8N184 647 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 TRAM1L1Q8N609 369 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 PLD5Q8N7P1 536 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 PIGXQ8TBF5 258 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 EEF1AKMT1Q8WVE0 214 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 PRR11Q96HE9 360 aaPredicted RBP7.81□□□□□ -1.16
USP47-203ENST00000399455 TBATAQ96M53 351 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 TMEM74Q96NL1 305 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 HHIPQ96QV1 700 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 TSC22D3Q99576 134 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 IPPKQ9H8X2 491 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 XPR1Q9UBH6 696 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 TMEM98Q9Y2Y6 226 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 KDM3BQ7LBC6 1761 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 GSC2O15499 205 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 REM1O75628 298 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 CD6P30203 668 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 KCNQ1P51787 676 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 CTBP2P56545 445 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 MRPS21P82921 87 aaKnown RBP7.81□□□□□ -1.16
USP47-203ENST00000399455 TDGQ13569 410 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 ENPP2Q13822 863 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 SPIN4Q56A73 249 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 ADGRG6Q86SQ4 1221 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 REXO1L1PQ8IX06 675 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 MDM1Q8TC05 714 aa7.81□□□□□ -1.16
USP47-203ENST00000399455 IPCEF1Q8WWN9 437 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms