RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ASS1P00966 412 aaKnown RBP6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 PCCBP05166 539 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 EIF2S1P05198 315 aaKnown RBP6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 HOXC6P09630 235 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 DDX5P17844 614 aaKnown RBP6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 NAMPTP43490 491 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 MMP13P45452 471 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 SOX4Q06945 474 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 BCL7AQ4VC05 210 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 GPAT3Q53EU6 434 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 KHDC1LQ5JSQ8 128 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZNF484Q5JVG2 852 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZNF618Q5T7W0 954 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 AGBL2Q5U5Z8 902 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 MTSS1LQ765P7 747 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 USP37Q86T82 979 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 ACOT1Q86TX2 421 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 IGDCC3Q8IVU1 814 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZZZ3Q8IYH5 903 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 UNC5BQ8IZJ1 945 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 LZTR1Q8N653 840 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 RCBTB1Q8NDN9 531 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 TRPC4APQ8TEL6 797 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 KBTBD7Q8WVZ9 684 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 EDAQ92838 391 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZNF707Q96C28 371 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 C12orf42Q96LP6 360 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZNF317Q96PQ6 595 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 GPR20Q99678 358 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 BBS2Q9BXC9 721 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZNF350Q9GZX5 532 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 CDT1Q9H211 546 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 METTL7AQ9H8H3 244 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 RBPJLQ9UBG7 517 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 TDRKHQ9Y2W6 561 aaKnown RBP6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 U3KQV3 271 aa6.13□□□□□ -1.43
TRAPPC13-202ENST00000399438 UGT1A9O60656 530 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 CRTAPO75718 401 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 STAG3L1P0CL83 205 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 FUT1P19526 365 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 MMP8P22894 467 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 CD27P26842 260 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 ADORA2BP29275 332 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 GBP1P32455 592 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 RPA3P35244 121 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 ASPAP45381 313 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 PRMT2P55345 433 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 WDR4P57081 412 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZNF200P98182 395 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 ADRM1Q16186 407 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 CA9Q16790 459 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 DUOXA2Q1HG44 320 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 DPY19L1Q2PZI1 675 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 GALNTL6Q49A17 601 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 NAIF1Q69YI7 327 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 THOC7Q6I9Y2 204 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 TRNP1Q6NT89 227 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 PSRC1Q6PGN9 363 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZNF852Q6ZMS4 543 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 BIVMQ86UB2 503 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 CTAGE3PQ8IX95 158 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 ANKFN1Q8N957 763 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 CCDC63Q8NA47 563 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 PIK3C3Q8NEB9 887 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 TRPV1Q8NER1 839 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 BBS1Q8NFJ9 593 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 CALML6Q8TD86 181 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 RNASE8Q8TDE3 154 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 OPTNQ96CV9 577 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 PRR11Q96HE9 360 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 PEBP4Q96S96 227 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 DPEP3Q9H4B8 488 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 UGT1A7Q9HAW7 530 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 UGT1A10Q9HAW8 530 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 UGT1A8Q9HAW9 530 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 SPATS2LQ9NUQ6 558 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 SETD4Q9NVD3 440 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 PHF24Q9UPV7 400 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 PPIL1Q9Y3C6 166 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 PARP14Q460N5 1801 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 COL11A1P12107 1806 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 TMEM191CA6NGB0 347 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 E5RJQ4 531 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 H0Y8G0 127 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 BCAT2O15382 392 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 LIASO43766 372 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 LRCH4O75427 683 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 TOM1L1O75674 476 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 CRYGCP07315 174 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 NUDT17P0C025 328 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 CYP3A5P20815 502 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 CA4P22748 312 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 GRIA1P42261 906 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 DGKEP52429 567 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 TMEM115Q12893 351 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 SCGB2A2Q13296 93 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 SLC1A5Q15758 541 aa6.12□□□□□ -1.43
TRAPPC13-202ENST00000399438 SNCBQ16143 134 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms