RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 KCNE4Q8WWG9 221 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 LPGAT1Q92604 370 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 FAM136AQ96C01 138 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 STAMBPL1Q96FJ0 436 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 C16orf45Q96MC5 204 aaPredicted RBP13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CTRCQ99895 268 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 HGH1Q9BTY7 390 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CARD6Q9BX69 1037 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 HRASLS2Q9NWW9 162 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 EPHA6Q9UF33 1036 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CDYLQ9Y232 598 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 HEBP2Q9Y5Z4 205 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 AHCTF1Q8WYP5 2266 aa13.72□□□□□ -0.21
HLA-DQB1-202ENST00000399079 OR5K3A6NET4 321 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 TP73O15350 636 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 USP1O94782 785 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ANKRD34CP0C6C1 535 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 AOAHP28039 575 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ITGA8P53708 1063 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 TLE3Q04726 772 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 C2orf54Q08AI8 447 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CTBP1Q13363 440 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 TGIF1Q15583 401 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 BBS9Q3SYG4 887 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 HP1BP3Q5SSJ5 553 aaPredicted RBP13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CACHD1Q5VU97 1274 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ARMC3Q5W041 872 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ANKS6Q68DC2 871 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ZNF470Q6ECI4 717 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 HIBCHQ6NVY1 386 aaPredicted RBP13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 KLHL35Q6PF15 583 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ZFAND4Q86XD8 727 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 IGDCC3Q8IVU1 814 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ACVR1CQ8NER5 493 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 OR52E1Q8NGJ3 308 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 LCN9Q8WX39 176 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ZDHHC12Q96GR4 267 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 RAB33BQ9H082 229 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 XKR8Q9H6D3 395 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 APMAPQ9HDC9 416 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 C20orf96Q9NUD7 363 aaPredicted RBP13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 WDR70Q9NW82 654 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SLC39A1Q9NY26 324 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 GNPTGQ9UJJ9 305 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ASF1AQ9Y294 204 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 B3GALT1Q9Y5Z6 326 aa13.71□□□□□ -0.21
HLA-DQB1-202ENST00000399079 IGHV5-51A0A0C4DH38 117 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 EFCAB8A8MWE9 144 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 F8W8V4 182 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 KLK10O43240 276 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 NIPSNAP2O75323 286 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 GPC4O75487 556 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SEC31AO94979 1220 aaKnown RBP13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 POLR2CP19387 275 aaPredicted RBP13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 OGNP20774 298 aaKnown RBP13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 RPS3P23396 243 aaKnown RBP eCLIP13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 NDUFS1P28331 727 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ABCG1P45844 678 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SH3BP2P78314 561 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 THOC5Q13769 683 aaKnown RBP13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 MORF4L2Q15014 288 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 LONRF1Q17RB8 773 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TMEM164Q5U3C3 297 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SPNS2Q8IVW8 549 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SLC22A15Q8IZD6 547 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ASZ1Q8WWH4 475 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 RNF31Q96EP0 1072 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SNF8Q96H20 258 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PPM1MQ96MI6 270 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TAAR9Q96RI9 348 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TCF12Q99081 682 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 MAP3K3Q99759 626 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TSSK1BQ9BXA7 367 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SRMSQ9H3Y6 488 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 MVB12BQ9H7P6 319 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 GALPQ9UBC7 116 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 RALYQ9UKM9 306 aaKnown RBP13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SNX24Q9Y343 169 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 FAM169AQ9Y6X4 670 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 MGAQ8IWI9 3026 aa13.7□□□□□ -0.22
HLA-DQB1-202ENST00000399079 B4E171 279 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 BTN3A3O00478 584 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TOX3O15405 576 aaPredicted RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 S1PR4O95977 384 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 APOA4P06727 396 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TPBGLP0DKB5 382 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PGAM1P18669 254 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 TSPAN7P41732 249 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 SLC1A2P43004 574 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 RPL21P46778 160 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 MC2RQ01718 297 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 PLOD1Q02809 727 aaPredicted RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 ABRQ12979 859 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CLN3Q13286 438 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 CRYMQ14894 314 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 HSP90AA5PQ58FG0 334 aa13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 DNTTIP2Q5QJE6 756 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 RNF187Q5TA31 235 aaPredicted RBP13.69□□□□□ -0.22
HLA-DQB1-202ENST00000399079 FBXO38Q6PIJ6 1188 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms