RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 QKIQ96PU8 341 aaKnown RBP eCLIP11.68□□□□□ -0.54
TFF3-202ENST00000398431 TRAPPC9Q96Q05 1148 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 CCM2Q9BSQ5 444 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 FICDQ9BVA6 458 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 PITPNM3Q9BZ71 974 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 OR52A5Q9H2C5 316 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 SYTL2Q9HCH5 934 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 ABHD10Q9NUJ1 306 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 SOHLH2Q9NX45 425 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 TRHDEQ9UKU6 1024 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 INTUQ9ULD6 942 aa11.68□□□□□ -0.54
TFF3-202ENST00000398431 C17orf113A0A1B0GUU1 675 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 C5orf60A6NFR6 353 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 HACD1B0YJ81 288 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 TMEM150CB9EJG8 249 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 BTN3A1O00481 513 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 HCRTR1O43613 425 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 KRT86O43790 486 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 SPOPO43791 374 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 RRP9O43818 475 aaKnown RBP11.67□□□□□ -0.54
TFF3-202ENST00000398431 ZRANB2O95218 330 aaKnown RBP eCLIP11.67□□□□□ -0.54
TFF3-202ENST00000398431 SLC35G4P0C7Q5 338 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 PVRP15151 417 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 COL8A1P27658 744 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 RBL1P28749 1068 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 PDHA2P29803 388 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 MARCKSL1P49006 195 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 LMAN1P49257 510 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 PRLHRP49683 370 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 CDKN1CP49918 316 aaPredicted RBP11.67□□□□□ -0.54
TFF3-202ENST00000398431 TBX2Q13207 712 aaPredicted RBP11.67□□□□□ -0.54
TFF3-202ENST00000398431 ODF2Q5BJF6 829 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 TFDP3Q5H9I0 405 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 CRB2Q5IJ48 1285 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 DENND5AQ6IQ26 1287 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 CDHR3Q6ZTQ4 885 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 MTERF4Q7Z6M4 381 aaKnown RBP11.67□□□□□ -0.54
TFF3-202ENST00000398431 TMEM151BQ8IW70 566 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 KATNAL2Q8IYT4 538 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 RCOR2Q8IZ40 523 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 ADGRF3Q8IZF5 1079 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 LCN9Q8WX39 176 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 PNPLA2Q96AD5 504 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 SNRNP40Q96DI7 357 aaKnown RBP11.67□□□□□ -0.54
TFF3-202ENST00000398431 TCTN2Q96GX1 697 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 CCDC42Q96M95 316 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 FERD3LQ96RJ6 166 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 APOL2Q9BQE5 337 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 KLHL25Q9H0H3 589 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 SRMSQ9H3Y6 488 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 TFB2MQ9H5Q4 396 aaKnown RBP11.67□□□□□ -0.54
TFF3-202ENST00000398431 FAM96AQ9H5X1 160 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 ACTR5Q9H9F9 607 aaPredicted RBP11.67□□□□□ -0.54
TFF3-202ENST00000398431 FAM60AQ9NP50 221 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 SLAMF7Q9NQ25 335 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 CASS4Q9NQ75 786 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 RSPH14Q9UHP6 348 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 SERTAD3Q9UJW9 196 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 MDC1Q14676 2089 aaKnown RBP11.67□□□□□ -0.54
TFF3-202ENST00000398431 ANKRD12Q6UB98 2062 aa11.67□□□□□ -0.54
TFF3-202ENST00000398431 PRRC2CQ9Y520 2896 aaKnown RBP11.67□□□□□ -0.54
TFF3-202ENST00000398431 ITPR2Q14571 2701 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 IGLV3-16A0A075B6K0 115 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 A1L4Q6 167 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 CCDC66A2RUB6 948 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 C2orf81A6NN90 581 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 ZNF749O43361 778 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 PSTPIP1O43586 416 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 CBX6O95503 412 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 TPBGLP0DKB5 382 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 CBSLP0DN79 551 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 PYGMP11217 842 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 ATP1B2P14415 290 aaPredicted RBP11.66□□□□□ -0.54
TFF3-202ENST00000398431 CBSP35520 551 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 TNNT3P45378 269 aaPredicted RBP11.66□□□□□ -0.54
TFF3-202ENST00000398431 GABRA4P48169 554 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 GEMP55040 296 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 HADHBP55084 474 aaKnown RBP11.66□□□□□ -0.54
TFF3-202ENST00000398431 PRKAA1Q13131 559 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 RAPSNQ13702 412 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 ATP1A4Q13733 1029 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 NCF4Q15080 339 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 BBS12Q6ZW61 710 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 HPS6Q86YV9 775 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 NXPE1Q8N323 547 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 OR52E1Q8NGJ3 308 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 PRR7Q8TB68 274 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 HM13Q8TCT9 377 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 KRT35Q92764 455 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 RANBP9Q96S59 729 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 FSD1LQ9BXM9 530 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 GBA3Q9H227 469 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 XKR8Q9H6D3 395 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 COG4Q9H9E3 785 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 ZNHIT6Q9NWK9 470 aaKnown RBP11.66□□□□□ -0.54
TFF3-202ENST00000398431 GPR83Q9NYM4 423 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 C5AR2Q9P296 337 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 ERRFI1Q9UJM3 462 aaPredicted RBP11.66□□□□□ -0.54
TFF3-202ENST00000398431 HEBP2Q9Y5Z4 205 aa11.66□□□□□ -0.54
TFF3-202ENST00000398431 GSAPA4D1B5 854 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms