RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 PYGBP11216 843 aa19.02■□□□□ 0.64
MAP1LC3A-203ENST00000397709 SLC18A2Q05940 514 aa19.02■□□□□ 0.64
MAP1LC3A-203ENST00000397709 DEFB133Q30KQ1 61 aa19.02■□□□□ 0.64
MAP1LC3A-203ENST00000397709 IYDQ6PHW0 289 aa19.02■□□□□ 0.64
MAP1LC3A-203ENST00000397709 PRR23CQ6ZRP0 262 aa19.02■□□□□ 0.64
MAP1LC3A-203ENST00000397709 GATAD2AQ86YP4 633 aa19.02■□□□□ 0.64
MAP1LC3A-203ENST00000397709 RASGRP3Q8IV61 690 aa19.02■□□□□ 0.64
MAP1LC3A-203ENST00000397709 MYO1HQ8N1T3 1032 aa19.02■□□□□ 0.64
MAP1LC3A-203ENST00000397709 ZDHHC1Q8WTX9 485 aa19.02■□□□□ 0.64
MAP1LC3A-203ENST00000397709 INSM2Q96T92 566 aaPredicted RBP19.02■□□□□ 0.64
MAP1LC3A-203ENST00000397709 EDEM2Q9BV94 578 aa19.02■□□□□ 0.64
MAP1LC3A-203ENST00000397709 ACBD3Q9H3P7 528 aa19.02■□□□□ 0.64
MAP1LC3A-203ENST00000397709 SENP1Q9P0U3 644 aa19.02■□□□□ 0.64
MAP1LC3A-203ENST00000397709 PCDHGB2Q9Y5G2 931 aa19.02■□□□□ 0.64
MAP1LC3A-203ENST00000397709 OR5K4A6NMS3 321 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 GOLGA8RI6L899 631 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 IFRD1O00458 451 aaPredicted RBP19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 CDX4O14627 284 aaPredicted RBP19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 KLHL2O95198 593 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 LTA4HP09960 611 aaKnown RBP19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 COL6A2P12110 1019 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 SLC2A4P14672 509 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 CD1DP15813 335 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 HALP42357 657 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 ABRQ12979 859 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 CSHL1Q14406 222 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 RPE65Q16518 533 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 C6orf132Q5T0Z8 1188 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 OGFOD3Q6PK18 319 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 NAGSQ8N159 534 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 PLD6Q8N2A8 252 aaKnown RBP19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 SPATA6LQ8N4H0 392 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 KCTD4Q8WVF5 259 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 PKNOX2Q96KN3 472 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 C12orf66Q96MD2 445 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 STMN4Q9H169 189 aaPredicted RBP19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 NLGN3Q9NZ94 848 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 RAPGEFL1Q9UHV5 662 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 IKZF3Q9UKT9 509 aa19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 RUVBL2Q9Y230 463 aaKnown RBP19.01■□□□□ 0.63
MAP1LC3A-203ENST00000397709 KIR2DS5A0A0G2JLQ3 304 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 A0A0G2JNG1 304 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 OR52A4PA6NMU1 304 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 B4DGG1 531 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 KIR2DS3K7RE56 304 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 FFAR2O15552 330 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 OPA1O60313 960 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 NOBOXO60393 691 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 FOXD2O60548 495 aaPredicted RBP19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 PSIP1O75475 530 aaKnown RBP19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 TOP3BO95985 862 aaKnown RBP19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 MTHFD1P11586 935 aaKnown RBP19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 KRT4P19013 534 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 MAPK9P45984 424 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 ATP6V0D1P61421 351 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 KIR2DS5Q14953 304 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 AGBL2Q5U5Z8 902 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 UNC5DQ6UXZ4 953 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 ASCL5Q7RTU5 278 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 LCA5Q86VQ0 697 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 C17orf82Q86X59 251 aaPredicted RBP19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 SFTPA2Q8IWL1 248 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 SRRM1Q8IYB3 904 aaKnown RBP19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 C4orf33Q8N1A6 199 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 SFRP1Q8N474 314 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 OR4C6Q8NH72 309 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 SKA2Q8WVK7 121 aaPredicted RBP19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 PATE1Q8WXA2 126 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 ASB11Q8WXH4 323 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 TFGQ92734 400 aaPredicted RBP19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 ARL8AQ96BM9 186 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 NXNL1Q96CM4 212 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 TLCD1Q96CP7 247 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 FOPNLQ96NB1 174 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 GPR78Q96P69 363 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 DUSP23Q9BVJ7 150 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 RXFP3Q9NSD7 469 aa19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 ZNF624Q9P2J8 865 aaPredicted RBP19■□□□□ 0.63
MAP1LC3A-203ENST00000397709 GFYI3L273 518 aa18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 C8GP07360 202 aa18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 ALPPL2P10696 532 aa18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 XRCC1P18887 633 aaPredicted RBP18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 UBE2IP63279 158 aaKnown RBP18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 SP140Q13342 867 aa18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 FAM83EQ2M2I3 478 aa18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 DUS1LQ6P1R4 473 aaKnown RBP18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 DBX2Q6ZNG2 339 aa18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 EXOC3L1Q86VI1 746 aa18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 GPR156Q8NFN8 814 aa18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 SLC37A2Q8TED4 501 aa18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 UNKQ9C0B0 810 aaKnown RBP18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 NMRAL1Q9HBL8 299 aa18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 TMEM9BQ9NQ34 198 aa18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 IMP3Q9NV31 184 aaKnown RBP18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 MKS1Q9NXB0 559 aa18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 ADAMTS6Q9UKP5 1117 aa18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 HEBP2Q9Y5Z4 205 aa18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 ACTL7BQ9Y614 415 aa18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 CFAP20Q9Y6A4 193 aaKnown RBP18.99■□□□□ 0.63
MAP1LC3A-203ENST00000397709 NPEPPSL1A6NEC2 478 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms