RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 TEX37Q96LM6 180 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 TRIM15Q9C019 465 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 ZYG11BQ9C0D3 744 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 ING2Q9H160 280 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 CRISPLD1Q9H336 500 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 GSTO2Q9H4Y5 243 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 EML4Q9HC35 981 aaKnown RBP4.95□□□□□ -1.62
SSR1-202ENST00000397511 SYTL2Q9HCH5 934 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 NSMCE4AQ9NXX6 385 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 ATPIF1Q9UII2 106 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 IKZF3Q9UKT9 509 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 SLC45A1Q9Y2W3 748 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 NUP214P35658 2090 aaPredicted RBP4.95□□□□□ -1.62
SSR1-202ENST00000397511 CHD7Q9P2D1 2997 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 A0A087X1B8 175 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 TEX51A0A1B0GUA7 166 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 CBX4O00257 560 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 CDC7O00311 574 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 TNFRSF10BO14763 440 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 ANGPT2O15123 496 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 GPR37O15354 613 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 CD3EAPO15446 510 aaKnown RBP4.95□□□□□ -1.62
SSR1-202ENST00000397511 FGF10O15520 208 aaPredicted RBP4.95□□□□□ -1.62
SSR1-202ENST00000397511 BNIP3LO60238 219 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 DNAJB5O75953 348 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 CDK14O94921 469 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 KCNK2O95069 426 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 RASAL1O95294 804 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 TRIM16O95361 564 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 SEC24AO95486 1093 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 PEX11BO96011 259 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 MMP2P08253 660 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 GLULP15104 373 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 ATP6V1B2P21281 511 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 CCND3P30281 292 aaPredicted RBP4.95□□□□□ -1.62
SSR1-202ENST00000397511 GRK3P35626 688 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 RGRP47804 291 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 SLC9A3P48764 834 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 CLK1P49759 484 aaKnown RBP4.95□□□□□ -1.62
SSR1-202ENST00000397511 RPS24P62847 133 aaKnown RBP4.95□□□□□ -1.62
SSR1-202ENST00000397511 BNIP2Q12982 314 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 DUSP4Q13115 394 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 PLCL1Q15111 1095 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 MAPRE2Q15555 327 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 ATP6AP1Q15904 470 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 C18orf21Q32NC0 220 aaPredicted RBP4.95□□□□□ -1.62
SSR1-202ENST00000397511 SAMD4BQ5PRF9 694 aaKnown RBP4.95□□□□□ -1.62
SSR1-202ENST00000397511 ZNF678Q5SXM1 525 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 ATAD3CQ5T2N8 411 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 AGAP6Q5VW22 663 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 KIAA0930Q6ICG6 404 aaPredicted RBP4.95□□□□□ -1.62
SSR1-202ENST00000397511 TIGD7Q6NT04 549 aaPredicted RBP4.95□□□□□ -1.62
SSR1-202ENST00000397511 KDELC1Q6UW63 502 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 LYSMD2Q8IV50 215 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 LILRB1Q8NHL6 650 aaPredicted RBP4.95□□□□□ -1.62
SSR1-202ENST00000397511 TWIST2Q8WVJ9 160 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 SDCCAG3Q96C92 435 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 IMP4Q96G21 291 aaKnown RBP4.95□□□□□ -1.62
SSR1-202ENST00000397511 CENPNQ96H22 339 aaPredicted RBP4.95□□□□□ -1.62
SSR1-202ENST00000397511 SERPINB11Q96P15 392 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 AGAP4Q96P64 663 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 SLC30A3Q99726 388 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 BCL7BQ9BQE9 202 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 SLC25A51Q9H1U9 297 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 SMOC2Q9H3U7 446 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 ZNF385DQ9H6B1 395 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 MARCH2Q9P0N8 246 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 ACAD8Q9UKU7 415 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 BAG5Q9UL15 447 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 ASB1Q9Y576 335 aa4.95□□□□□ -1.62
SSR1-202ENST00000397511 SPTBN5Q9NRC6 3674 aaKnown RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 A0A0U1RQF3 1178 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 MOXD2PA6NHM9 499 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 SLCO1B7G3V0H7 640 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 hCG_2039718K7EN88 272 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 IFRD1O00458 451 aaPredicted RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 BTN3A1O00481 513 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 INPP4BO15327 924 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 LDB2O43679 373 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 SRP72O76094 671 aaKnown RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 RHOBTB1O94844 696 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 NDST3O95803 873 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 GUCA1CO95843 209 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 IGLV3-25P01717 112 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 APOA1P02647 267 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 CAPN3P20807 821 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 FLT3LGP49771 235 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 AP2S1P53680 142 aaPredicted RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 ATN1P54259 1190 aaPredicted RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 RAD51Q06609 339 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 CRHR2Q13324 411 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 SIM2Q14190 667 aaPredicted RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 ACAP2Q15057 778 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 CTXN3Q4LDR2 81 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 UNC50Q53HI1 259 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 RBM48Q5RL73 367 aaKnown RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 OTUD3Q5T2D3 398 aaPredicted RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 XAF1Q6GPH4 301 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 DESI1Q6ICB0 168 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 TRAF7Q6Q0C0 670 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms