RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 WDR45BQ5MNZ6 344 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 LIPMQ5VYY2 423 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 METRNLQ641Q3 311 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 MFSD2AQ8NA29 543 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 SREK1Q8WXA9 508 aaKnown RBP20.71■□□□□ 0.91
CPNE1-204ENST00000397443 ESAMQ96AP7 390 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 FOPNLQ96NB1 174 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 TIMM29Q9BSF4 260 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 WWP1Q9H0M0 922 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 KLF15Q9UIH9 416 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 PDE10AQ9Y233 779 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 DMDP11532 3685 aa20.71■□□□□ 0.91
CPNE1-204ENST00000397443 A0A1W2PR77 199 aa20.7■□□□□ 0.91
CPNE1-204ENST00000397443 LRRC14BA6NHZ5 514 aa20.7■□□□□ 0.91
CPNE1-204ENST00000397443 TNFRSF10CO14798 259 aa20.7■□□□□ 0.91
CPNE1-204ENST00000397443 FFAR2O15552 330 aa20.7■□□□□ 0.91
CPNE1-204ENST00000397443 IPO13O94829 963 aaKnown RBP20.7■□□□□ 0.91
CPNE1-204ENST00000397443 SIX3O95343 332 aaPredicted RBP20.7■□□□□ 0.91
CPNE1-204ENST00000397443 CTBSQ01459 385 aa20.7■□□□□ 0.91
CPNE1-204ENST00000397443 BST1Q10588 318 aa20.7■□□□□ 0.91
CPNE1-204ENST00000397443 C18orf21Q32NC0 220 aaPredicted RBP20.7■□□□□ 0.91
CPNE1-204ENST00000397443 SLC30A9Q6PML9 568 aa20.7■□□□□ 0.91
CPNE1-204ENST00000397443 NEK10Q6ZWH5 1172 aa20.7■□□□□ 0.91
CPNE1-204ENST00000397443 TMEM237Q96Q45 408 aa20.7■□□□□ 0.91
CPNE1-204ENST00000397443 OR52A5Q9H2C5 316 aa20.7■□□□□ 0.91
CPNE1-204ENST00000397443 DNAJC28Q9NX36 388 aa20.7■□□□□ 0.91
CPNE1-204ENST00000397443 OARD1Q9Y530 152 aa20.7■□□□□ 0.91
CPNE1-204ENST00000397443 ZFC3H1O60293 1989 aaKnown RBP20.7■□□□□ 0.9
CPNE1-204ENST00000397443 PDZK1P1A8MUH7 402 aa20.7■□□□□ 0.9
CPNE1-204ENST00000397443 MATN4O95460 622 aa20.7■□□□□ 0.9
CPNE1-204ENST00000397443 TNFP01375 233 aa20.7■□□□□ 0.9
CPNE1-204ENST00000397443 C8GP07360 202 aa20.7■□□□□ 0.9
CPNE1-204ENST00000397443 CCR10P46092 362 aa20.7■□□□□ 0.9
CPNE1-204ENST00000397443 RPIAP49247 311 aa20.7■□□□□ 0.9
CPNE1-204ENST00000397443 AGTR2P50052 363 aa20.7■□□□□ 0.9
CPNE1-204ENST00000397443 LYSMD4Q5XG99 296 aa20.7■□□□□ 0.9
CPNE1-204ENST00000397443 CEP68Q76N32 757 aa20.7■□□□□ 0.9
CPNE1-204ENST00000397443 LRRC34Q8IZ02 419 aa20.7■□□□□ 0.9
CPNE1-204ENST00000397443 GATA5Q9BWX5 397 aaPredicted RBP20.7■□□□□ 0.9
CPNE1-204ENST00000397443 PRDM8Q9NQV8 689 aa20.7■□□□□ 0.9
CPNE1-204ENST00000397443 ARL15Q9NXU5 204 aa20.7■□□□□ 0.9
CPNE1-204ENST00000397443 FBXO4Q9UKT5 387 aa20.7■□□□□ 0.9
CPNE1-204ENST00000397443 WDR37Q9Y2I8 494 aa20.7■□□□□ 0.9
CPNE1-204ENST00000397443 LAMA1P25391 3075 aa20.7■□□□□ 0.9
CPNE1-204ENST00000397443 PABPN1LA6NDY0 278 aaKnown RBP20.69■□□□□ 0.9
CPNE1-204ENST00000397443 ARHGEF33A8MVX0 844 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 TLR4O00206 839 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 LYPLA1O75608 230 aaPredicted RBP20.69■□□□□ 0.9
CPNE1-204ENST00000397443 S100BP04271 92 aaPredicted RBP20.69■□□□□ 0.9
CPNE1-204ENST00000397443 SLC35G4P0C7Q5 338 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 CYP2A7P20853 494 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 PRKAA2P54646 552 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 PLOD1Q02809 727 aaPredicted RBP20.69■□□□□ 0.9
CPNE1-204ENST00000397443 STX3Q13277 289 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 CCSMST1Q4G0I0 132 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 PRAMEF14Q5SWL7 426 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 PARGQ86W56 976 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 TRIM42Q8IWZ5 723 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 PHC3Q8NDX5 983 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 C1orf216Q8TAB5 229 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 DNASE2BQ8WZ79 361 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 SLC12A9Q9BXP2 914 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 DPEP2Q9H4A9 486 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 CCDC134Q9H6E4 229 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 PARVBQ9HBI1 364 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 GPR27Q9NS67 375 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 ASF1AQ9Y294 204 aa20.69■□□□□ 0.9
CPNE1-204ENST00000397443 BCAT2O15382 392 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-204ENST00000397443 ITM2AO43736 263 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 SHOX2O60902 331 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-204ENST00000397443 SERPINE1P05121 402 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 HIST1H2AGP0C0S8 130 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-204ENST00000397443 HIST1H2ADP20671 130 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 IDSP22304 550 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 MAP4P27816 1152 aaKnown RBP20.68■□□□□ 0.9
CPNE1-204ENST00000397443 ACTR1BP42025 376 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 ACTR1AP61163 376 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 ANGPT1Q15389 498 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.68■□□□□ 0.9
CPNE1-204ENST00000397443 CFAP157Q5JU67 520 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 ATG16L1Q676U5 607 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 PMS2CLQ68D20 193 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 DUS1LQ6P1R4 473 aaKnown RBP20.68■□□□□ 0.9
CPNE1-204ENST00000397443 BMP8AQ7Z5Y6 402 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 PDZD3Q86UT5 571 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 SPATS2Q86XZ4 545 aaKnown RBP20.68■□□□□ 0.9
CPNE1-204ENST00000397443 SLC22A9Q8IVM8 553 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 HIST1H2AHQ96KK5 128 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 RMDN2Q96LZ7 410 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 HIST1H2AJQ99878 128 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 H2AFJQ9BTM1 129 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 TRIM54Q9BYV2 358 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 SHCBP1LQ9BZQ2 653 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 FGFR1OP2Q9NVK5 253 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 NUDT4Q9NZJ9 180 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 LRP4O75096 1905 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 GFYI3L273 518 aa20.68■□□□□ 0.9
CPNE1-204ENST00000397443 IFRD1O00458 451 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-204ENST00000397443 PSIP1O75475 530 aaKnown RBP20.68■□□□□ 0.9
CPNE1-204ENST00000397443 TSPAN8P19075 237 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms