RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 ZDHHC18Q9NUE0 388 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 SLC24A2Q9UI40 661 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 ASF1AQ9Y294 204 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 FRYQ5TBA9 3013 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 ACACBO00763 2458 aa20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 IGHV5-10-1A0A0J9YXX1 117 aa20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 TMX2-CTNND1H3BSU7 103 aa20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 KPNA5O15131 536 aa20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 MPSTP25325 297 aa20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 ACADLP28330 430 aa20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 CAPZBP47756 277 aa20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 C3orf38Q5JPI3 329 aa20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 TEDDM1Q5T9Z0 273 aa20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 WDR74Q6RFH5 385 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 PALM2Q8IXS6 379 aa20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 ZFPM2Q8WW38 1151 aa20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 NXPE2Q96DL1 559 aa20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 LIN37Q96GY3 246 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 CCDC74BQ96LY2 380 aa20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 MVB12BQ9H7P6 319 aa20.65■□□□□ 0.9
TSPAN4-206ENST00000397408 IGF2RP11717 2491 aa20.64■□□□□ 0.9
TSPAN4-206ENST00000397408 C1QTNF9BB2RNN3 333 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 SLCO2B1O94956 709 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 C1QTNF9P0C862 333 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 THRAP10827 490 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 SSTR1P30872 391 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 ABCG1P45844 678 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 LIMK2P53671 638 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 MGAT5Q09328 741 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 DNTTIP2Q5QJE6 756 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 PLEKHS1Q5SXH7 462 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 TMEM71Q6P5X7 295 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 UNQ6494/PRO21346Q6UXR6 183 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 ACVR1CQ8NER5 493 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 OR5AR1Q8NGP9 310 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 C9orf72Q96LT7 481 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 NRSN2Q9GZP1 204 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 L2HGDHQ9H9P8 463 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 ZFATQ9P243 1243 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 GALPQ9UBC7 116 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 SATB2Q9UPW6 733 aa20.64■□□□□ 0.89
TSPAN4-206ENST00000397408 CCDC187A0A096LP49 1063 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 A0A1W2PNU3 283 aaPredicted RBP20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 AGRPO00253 132 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 ZNF500O60304 480 aaPredicted RBP20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 MPOP05164 745 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 GABRB3P28472 473 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 GFERP55789 205 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 PRKG2Q13237 762 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 SNAP47Q5SQN1 464 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 ZBTB2Q8N680 514 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 LRRN4CLQ8ND94 238 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 RCBTB1Q8NDN9 531 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 SKA2Q8WVK7 121 aaPredicted RBP20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 IFT81Q8WYA0 676 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 KCNJ9Q92806 393 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 NDNQ99608 321 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 AARSD1Q9BTE6 412 aaKnown RBP20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 FAM129AQ9BZQ8 928 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 MOCS1Q9NZB8 636 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 KLHL3Q9UH77 587 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 TSR3Q9UJK0 312 aaKnown RBP20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 MED16Q9Y2X0 877 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 COMMD10Q9Y6G5 202 aa20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 MN1Q10571 1320 aaPredicted RBP20.63■□□□□ 0.89
TSPAN4-206ENST00000397408 PMS2P1A4D2B8 440 aa20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 AHSGP02765 367 aa20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 MAGEA4P43358 317 aa20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 CLCN7P51798 805 aa20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 GABREP78334 506 aa20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 GALNT7Q86SF2 657 aa20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 PLXDC1Q8IUK5 500 aa20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 TBC1D21Q8IYX1 336 aa20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 SIDT2Q8NBJ9 832 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 OR52E1Q8NGJ3 308 aa20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 CFAP61Q8NHU2 1237 aa20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 WDR36Q8NI36 951 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 TGM7Q96PF1 710 aa20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 TRIT1Q9H3H1 467 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 MTRF1LQ9UGC7 380 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 AK5Q9Y6K8 562 aa20.62■□□□□ 0.89
TSPAN4-206ENST00000397408 ESPNB1AK53 854 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 CAPN5O15484 640 aaPredicted RBP20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 ABRQ12979 859 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 TRA2AQ13595 282 aaKnown RBP eCLIP20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 GBX1Q14549 363 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 C16orf72Q14CZ0 275 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 RTP5Q14D33 572 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 RBM20Q5T481 1227 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 KLHL35Q6PF15 583 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 FOXR1Q6PIV2 292 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 RAB11FIP2Q7L804 512 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 OOSP2Q86WS3 158 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 OR5K2Q8NHB8 316 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 GIMAP7Q8NHV1 300 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 LCN9Q8WX39 176 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 GPR21Q99679 349 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 SLC30A3Q99726 388 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 POLR1BQ9H9Y6 1135 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 LATS2Q9NRM7 1088 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms