RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 AKR1B10O60218 316 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 ANXA9O76027 345 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 SRP72O76094 671 aaKnown RBP16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 POLBP06746 335 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 RNF224P0DH78 156 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 CHRNA4P43681 627 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 PRLHRP49683 370 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 RPA4Q13156 261 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 NR6A1Q15406 480 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 ASTE1Q2TB18 679 aaPredicted RBP16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 PLEKHN1Q494U1 663 aaPredicted RBP16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 PRR30Q53SZ7 412 aaPredicted RBP16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 DET1Q7L5Y6 550 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 MRGPREQ86SM8 312 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 HOOK3Q86VS8 718 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 ZADH2Q8N4Q0 377 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 IPMKQ8NFU5 416 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 OR8K1Q8NGG5 319 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 PROKR1Q8TCW9 393 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 N4BP2L2Q92802 583 aaPredicted RBP16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 OXNAD1Q96HP4 312 aaPredicted RBP16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 RMDN2Q96LZ7 410 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 BARD1Q99728 777 aaKnown RBP16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 AGPAT4Q9NRZ5 378 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 ABCA12Q86UK0 2595 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 GOLGA6L19H0YKK7 550 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 GPR39O43194 453 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 ZNF749O43361 778 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 CST8O60676 142 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 KLF7O75840 302 aaPredicted RBP16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 CRTAMO95727 393 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 PTMSP20962 102 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 CDKN2BP42772 138 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 ARCN1P48444 511 aaKnown RBP16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 GEMP55040 296 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 NOMO1Q15155 1222 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 TCEAL1Q15170 157 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 KYNUQ16719 465 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 DCAF10Q5QP82 559 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 PRAMEF17Q5VTA0 474 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 DUS1LQ6P1R4 473 aaKnown RBP16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 MFSD7Q6UXD7 560 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 ZNF567Q8N184 647 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 GALNT16Q8N428 558 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 TCTN2Q96GX1 697 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 PPM1MQ96MI6 270 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 TRAPPC9Q96Q05 1148 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 FERD3LQ96RJ6 166 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 AP1M1Q9BXS5 423 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 ILKAPQ9H0C8 392 aaPredicted RBP16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 ASF1BQ9NVP2 202 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 LUZP4Q9P127 313 aa16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 GPN3Q9UHW5 284 aaPredicted RBP16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 COPG1Q9Y678 874 aaKnown RBP16.97■□□□□ 0.31
EXOSC3-202ENST00000396521 POLEQ07864 2286 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 CCDC66A2RUB6 948 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 LCA5LO95447 670 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 CLDN1O95832 211 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 ST6GAL1P15907 406 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 OTX2P32243 289 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 FOLR3P41439 243 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 TRIM14Q14142 442 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 PTCHD3Q3KNS1 767 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 GPR33Q49SQ1 333 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 TFDP3Q5H9I0 405 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 ZNF385CQ66K41 422 aaPredicted RBP16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 ZNF787Q6DD87 383 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 ITPRIPL1Q6GPH6 555 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 RHBDD2Q6NTF9 364 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 FBXO38Q6PIJ6 1188 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 B4GALNT4Q76KP1 1039 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 AMIGO1Q86WK6 493 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 CISD2Q8N5K1 135 aaKnown RBP16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 OR4K2Q8NGD2 314 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 PTERQ96BW5 349 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 LRRC45Q96CN5 670 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 C19orf60Q96EN9 201 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 PPP1R2P1Q96PQ5 205 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 DNAJC7Q99615 494 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 COPS8Q99627 209 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 SAE1Q9UBE0 346 aaPredicted RBP16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 RSPH14Q9UHP6 348 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 CRLS1Q9UJA2 301 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 SRPK3Q9UPE1 567 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 AAR2Q9Y312 384 aaKnown RBP16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 CACNA1DQ01668 2161 aa16.96■□□□□ 0.31
EXOSC3-202ENST00000396521 TNRC6AQ8NDV7 1962 aaKnown RBP16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 PSTPIP1O43586 416 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 BUD23O43709 281 aaKnown RBP16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 SGTAO43765 313 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 KRT86O43790 486 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 SPOPO43791 374 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 ATP1B2P14415 290 aaPredicted RBP16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 ITGALP20701 1170 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 CA5AP35218 305 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 PER3P56645 1201 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 DCDP81605 110 aaKnown RBP16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 RANBP10Q6VN20 620 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 NXPE1Q8N323 547 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 OR2Y1Q8NGV0 311 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms