RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 TSSK1BQ9BXA7 367 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 TMEM121BQ9BXQ6 578 aaPredicted RBP16.15■□□□□ 0.18
CXCL1-201ENST00000395761 VPS9D1Q9Y2B5 631 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 KNTC1P50748 2209 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 UNC13CQ8NB66 2214 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 A0A1W2PNU3 283 aaPredicted RBP16.14■□□□□ 0.17
CXCL1-201ENST00000395761 PMS2P1A4D2B8 440 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 AGRPO00253 132 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 IFRD1O00458 451 aaPredicted RBP16.14■□□□□ 0.17
CXCL1-201ENST00000395761 CHRM3P20309 590 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 ABCG1P45844 678 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 LEPRP48357 1165 aaKnown RBP16.14■□□□□ 0.17
CXCL1-201ENST00000395761 INHBCP55103 352 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 FRG1Q14331 258 aaKnown RBP16.14■□□□□ 0.17
CXCL1-201ENST00000395761 CCDC25Q86WR0 208 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 SLC22A15Q8IZD6 547 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 GSDMBQ8TAX9 411 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 NCSTNQ92542 709 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 RSC1A1Q92681 617 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 TFGQ92734 400 aaPredicted RBP16.14■□□□□ 0.17
CXCL1-201ENST00000395761 PANX3Q96QZ0 392 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 MOCS1Q9NZB8 636 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 SLC24A2Q9UI40 661 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 MED16Q9Y2X0 877 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 COLEC10Q9Y6Z7 277 aa16.14■□□□□ 0.17
CXCL1-201ENST00000395761 IGHV5-10-1A0A0J9YXX1 117 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 C1QTNF9BB2RNN3 333 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 H3BMM5 538 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 DUX1O43812 170 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 UBXN7O94888 489 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 SLCO2B1O94956 709 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 AHSGP02765 367 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 APOA4P06727 396 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 PROS1P07225 676 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 C1QTNF9P0C862 333 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 SSTR1P30872 391 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 PLOD1Q02809 727 aaPredicted RBP16.13■□□□□ 0.17
CXCL1-201ENST00000395761 ABRQ12979 859 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 PRKG2Q13237 762 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 KRT33BQ14525 404 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 SLMAPQ14BN4 828 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 CLPPQ16740 277 aaPredicted RBP16.13■□□□□ 0.17
CXCL1-201ENST00000395761 PHF19Q5T6S3 580 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 TMEM71Q6P5X7 295 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 OTOAQ7RTW8 1153 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 PALM2Q8IXS6 379 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 C9orf72Q96LT7 481 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 SLC30A3Q99726 388 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 TXLNGYQ9BZA5 131 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 KIR3DX1Q9H7L2 352 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 HEBP2Q9Y5Z4 205 aa16.13■□□□□ 0.17
CXCL1-201ENST00000395761 PIAS1O75925 651 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 FAM153BP0C7A2 387 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 AMD1P17707 334 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 CCKBRP32239 447 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 MAGEA4P43358 317 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 CLCN7P51798 805 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 LIMK2P53671 638 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 GPX6P59796 221 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 PLCL1Q15111 1095 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 TMED2Q15363 201 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 FAM153CQ494X1 144 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 SNAP47Q5SQN1 464 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 WDR74Q6RFH5 385 aaPredicted RBP16.12■□□□□ 0.17
CXCL1-201ENST00000395761 RCBTB1Q8NDN9 531 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 OR4D9Q8NGE8 314 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 OR5AR1Q8NGP9 310 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 ZFPM2Q8WW38 1151 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 CCDC74BQ96LY2 380 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 TMEM74Q96NL1 305 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 NDNQ99608 321 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 ZMYND15Q9H091 742 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 MVB12BQ9H7P6 319 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 SMYD2Q9NRG4 433 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 LATS2Q9NRM7 1088 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 PSAT1Q9Y617 370 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 CHD8Q9HCK8 2581 aa16.12■□□□□ 0.17
CXCL1-201ENST00000395761 A8MU76 341 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 TMX2-CTNND1H3BSU7 103 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 KPNA5O15131 536 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 MPOP05164 745 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 GSTA2P09210 222 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 TPBGLP0DKB5 382 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 THRAP10827 490 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 NDUFS1P28331 727 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 CAPZBP47756 277 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 GFERP55789 205 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 PPP1CAP62136 330 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 TIAL1Q01085 375 aaKnown RBP eCLIP16.11■□□□□ 0.17
CXCL1-201ENST00000395761 MGAT5Q09328 741 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 C16orf72Q14CZ0 275 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 PLEKHS1Q5SXH7 462 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 RBM20Q5T481 1227 aaKnown RBP16.11■□□□□ 0.17
CXCL1-201ENST00000395761 EMBQ6PCB8 327 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 KIAA0408Q6ZU52 694 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 CYS1Q717R9 158 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 ZBTB2Q8N680 514 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 SIDT2Q8NBJ9 832 aaKnown RBP16.11■□□□□ 0.17
CXCL1-201ENST00000395761 ACVR1CQ8NER5 493 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 OR4E2Q8NGC2 313 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms