RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 ITPKAP23677 461 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 NNMTP40261 264 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 TRAF3Q13114 568 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 XKR7Q5GH72 579 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 MTX3Q5HYI7 312 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 UBE2R2Q712K3 238 aaPredicted RBP17.55■□□□□ 0.4
SREBF1-204ENST00000395756 PDLIM5Q96HC4 596 aaKnown RBP17.55■□□□□ 0.4
SREBF1-204ENST00000395756 CIB1Q99828 191 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 C1QTNF3Q9BXJ4 246 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 CD244Q9BZW8 370 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 VCXQ9H320 206 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 SUCOQ9UBS9 1254 aaKnown RBP17.55■□□□□ 0.4
SREBF1-204ENST00000395756 OARD1Q9Y530 152 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 PIKFYVEQ9Y2I7 2098 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 KPNA3O00505 521 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-204ENST00000395756 CKMT2P17540 419 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 RPS3P23396 243 aaKnown RBP eCLIP17.54■□□□□ 0.41e-7■■■□□ 14.6
SREBF1-204ENST00000395756 ATP4BP51164 291 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 GRIN2CQ14957 1233 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 PCBP2Q15366 365 aaKnown RBP eCLIP17.54■□□□□ 0.41e-7■■■■■ 32.5
SREBF1-204ENST00000395756 GSTA3Q16772 222 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 TTLL9Q3SXZ7 439 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 OGFRL1Q5TC84 451 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-204ENST00000395756 ZFP1Q6P2D0 407 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 MACC1Q6ZN28 852 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 SLC22A15Q8IZD6 547 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 SLCO4A1Q96BD0 722 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 ECHDC3Q96DC8 303 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 RIOK2Q9BVS4 552 aaKnown RBP17.54■□□□□ 0.4
SREBF1-204ENST00000395756 ACTR8Q9H981 624 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 PCDH12Q9NPG4 1184 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 MRGBPQ9NV56 204 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 MYOCOSA0A1B0GUC4 107 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 A0A1W2PP18 115 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 A0A1W2PQ67 120 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 CTSLP07711 333 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 PBLDP30039 288 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-204ENST00000395756 ABRQ12979 859 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 DYNC1I2Q13409 638 aaKnown RBP17.54■□□□□ 0.4
SREBF1-204ENST00000395756 TLR1Q15399 786 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 IMPG1Q17R60 797 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 ELMSAN1Q6PJG2 1045 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 SPATA19Q7Z5L4 167 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 C12orf40Q86WS4 652 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 RNF175Q8N4F7 328 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 LILRA3Q8N6C8 439 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-204ENST00000395756 NUSAP1Q9BXS6 441 aaKnown RBP17.54■□□□□ 0.4
SREBF1-204ENST00000395756 FAM83DQ9H4H8 585 aa17.54■□□□□ 0.4
SREBF1-204ENST00000395756 ZNF490Q9ULM2 529 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-204ENST00000395756 TMEM202A6NGA9 273 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 UPK3BL1B0FP48 263 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 UPK3BL2E5RIL1 263 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 PEX1O43933 1283 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 VPS4BO75351 444 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 STK16O75716 305 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 NELFEP18615 380 aaKnown RBP17.53■□□□□ 0.4
SREBF1-204ENST00000395756 CD9P21926 228 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 RHDQ02161 417 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 FAM109BQ6ICB4 259 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-204ENST00000395756 METTL3Q86U44 580 aaKnown RBP17.53■□□□□ 0.4
SREBF1-204ENST00000395756 C7orf61Q8IZ16 206 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 ELMO1Q92556 727 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 ROPN1LQ96C74 230 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 HEPHQ9BQS7 1158 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 GID8Q9NWU2 228 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 COQ6Q9Y2Z9 468 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 ULK1O75385 1050 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 SEC22BO75396 215 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 OR56A5P0C7T3 313 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 EPB42P16452 691 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 LBX1P52954 281 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 CMPK2Q5EBM0 449 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 CYP20A1Q6UW02 462 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 SFTPA1Q8IWL2 248 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 SARDHQ9UL12 918 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 PDE10AQ9Y233 779 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 LINC01553A4QN01 128 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 HSPA8P11142 646 aaKnown RBP17.53■□□□□ 0.4
SREBF1-204ENST00000395756 MTPNP58546 118 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 POLR2LP62875 67 aaKnown RBP17.53■□□□□ 0.4
SREBF1-204ENST00000395756 PPIGQ13427 754 aaKnown RBP eCLIP17.53■□□□□ 0.41e-7■■■□□ 18.7
SREBF1-204ENST00000395756 TSTA3Q13630 321 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-204ENST00000395756 PDPRQ8NCN5 879 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 COQ10BQ9H8M1 238 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 KCTD5Q9NXV2 234 aa17.53■□□□□ 0.4
SREBF1-204ENST00000395756 PRSS51A0A1B0GVH4 220 aa17.52■□□□□ 0.4
SREBF1-204ENST00000395756 LSM1O15116 133 aaKnown RBP17.52■□□□□ 0.4
SREBF1-204ENST00000395756 PDK3Q15120 406 aa17.52■□□□□ 0.4
SREBF1-204ENST00000395756 ZXDCQ2QGD7 858 aaPredicted RBP17.52■□□□□ 0.4
SREBF1-204ENST00000395756 IYDQ6PHW0 289 aa17.52■□□□□ 0.4
SREBF1-204ENST00000395756 EFL1Q7Z2Z2 1120 aaKnown RBP17.52■□□□□ 0.4
SREBF1-204ENST00000395756 CBARPQ8N350 705 aaPredicted RBP17.52■□□□□ 0.4
SREBF1-204ENST00000395756 LMNTD1Q8N9Z9 388 aa17.52■□□□□ 0.4
SREBF1-204ENST00000395756 DTNBP1Q96EV8 351 aa17.52■□□□□ 0.4
SREBF1-204ENST00000395756 HOPXQ9BPY8 73 aaPredicted RBP17.52■□□□□ 0.4
SREBF1-204ENST00000395756 PFDN4Q9NQP4 134 aa17.52■□□□□ 0.4
SREBF1-204ENST00000395756 DUS2Q9NX74 493 aaKnown RBP17.52■□□□□ 0.4
SREBF1-204ENST00000395756 BBIP1A8MTZ0 92 aa17.52■□□□□ 0.39
SREBF1-204ENST00000395756 WASH3PC4AMC7 463 aa17.52■□□□□ 0.39
SREBF1-204ENST00000395756 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms