RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 IGLON5A6NGN9 336 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 LZTS3O60299 673 aaPredicted RBP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 RNGTTO60942 597 aaKnown RBP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 COX4I1P13073 169 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 GM2AP17900 193 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 PIK3R1P27986 724 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 EEF1DP29692 281 aaKnown RBP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 PPP2CBP62714 309 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 RPS21P63220 83 aaKnown RBP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 PPP2CAP67775 309 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 B4GALNT1Q00973 533 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 RPL6Q02878 288 aaKnown RBP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 CLCQ05315 142 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 CDC16Q13042 620 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 GBX1Q14549 363 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 ACOX1Q15067 660 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 TGFBIQ15582 683 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 ATP13A5Q4VNC0 1218 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 HSD11B1LQ7Z5J1 315 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 GPSM1Q86YR5 675 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 EXT2Q93063 718 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 RTKNQ9BST9 563 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 C6orf106Q9H6K1 298 aaPredicted RBP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 RAD18Q9NS91 495 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 SPATS2LQ9NUQ6 558 aaKnown RBP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 PKD2L2Q9NZM6 624 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 BAIAP2L1Q9UHR4 511 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 TMPRSS11EQ9UL52 423 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 MAP3K13O43283 966 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 PEX11AO75192 247 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 CBSLP0DN79 551 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 DGKAP23743 735 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 CCND1P24385 295 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 CBSP35520 551 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 PGM1P36871 562 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 ETV3P41162 512 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 RGS4P49798 205 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 CDH13P55290 713 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 PCBP2Q15366 365 aaKnown RBP eCLIP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 KIAA1161Q6NSJ0 714 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 METTL2BQ6P1Q9 378 aaKnown RBP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 NEK5Q6P3R8 708 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 LARP4Q71RC2 724 aaKnown RBP eCLIP14.82□□□□□ -0.049e-7■■■■■ 27.3
SCAF11-204ENST00000395454 WDR5BQ86VZ2 330 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 ZBTB2Q8N680 514 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 CLDN19Q8N6F1 224 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 ENDOVQ8N8Q3 282 aaKnown RBP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 RP9Q8TA86 221 aaKnown RBP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 KLK6Q92876 244 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 NSUN5Q96P11 429 aaKnown RBP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 LENG8Q96PV6 779 aaPredicted RBP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 COPS8Q99627 209 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 FAM126AQ9BYI3 521 aaPredicted RBP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 CD84Q9UIB8 345 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 ZFR2Q9UPR6 939 aaKnown RBP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 DNAJC15Q9Y5T4 150 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 ST14Q9Y5Y6 855 aa14.82□□□□□ -0.04
SCAF11-204ENST00000395454 COPG1Q9Y678 874 aaKnown RBP14.82□□□□□ -0.04
SCAF11-204ENST00000395454 PLXND1Q9Y4D7 1925 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 LRRC14BA6NHZ5 514 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 PSMD11O00231 422 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 E2F3O00716 465 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 AZIN1O14977 448 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 CHUKO15111 745 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 MLYCDO95822 493 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 PAK4O96013 591 aaPredicted RBP14.81□□□□□ -0.04
SCAF11-204ENST00000395454 THRAP10827 490 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 ATP4BP51164 291 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 IRX1P78414 480 aaPredicted RBP14.81□□□□□ -0.04
SCAF11-204ENST00000395454 SRSF5Q13243 272 aaKnown RBP14.81□□□□□ -0.04
SCAF11-204ENST00000395454 Q6ZVL8 140 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 HORMAD1Q86X24 394 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 CHCHD4Q8N4Q1 142 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 DEFB119Q8N690 84 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 POU5F2Q8N7G0 328 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 PANX3Q96QZ0 392 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 NUSAP1Q9BXS6 441 aaKnown RBP14.81□□□□□ -0.04
SCAF11-204ENST00000395454 MBD1Q9UIS9 605 aaPredicted RBP14.81□□□□□ -0.04
SCAF11-204ENST00000395454 OARD1Q9Y530 152 aa14.81□□□□□ -0.04
SCAF11-204ENST00000395454 WDR87Q6ZQQ6 2873 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 PPP6CO00743 305 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 SKAP2O75563 359 aaPredicted RBP14.8□□□□□ -0.04
SCAF11-204ENST00000395454 RECQL5O94762 991 aaPredicted RBP14.8□□□□□ -0.04
SCAF11-204ENST00000395454 SLC25A14O95258 325 aaPredicted RBP14.8□□□□□ -0.04
SCAF11-204ENST00000395454 ESRRBO95718 433 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 SP9P0CG40 484 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 BCKDHBP21953 392 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 SGCGQ13326 291 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 PTK2BQ14289 1009 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 ZNF528Q3MIS6 628 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 TTLL9Q3SXZ7 439 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 HENMT1Q5T8I9 393 aaKnown RBP14.8□□□□□ -0.04
SCAF11-204ENST00000395454 TMEM198Q66K66 360 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 PGM2L1Q6PCE3 622 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 SLC36A4Q6YBV0 504 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 RFLNAQ6ZTI6 216 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 ULK2Q8IYT8 1036 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 SNX19Q92543 992 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 C19orf60Q96EN9 201 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 ZNF382Q96SR6 550 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms