RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 ABCA7Q8IZY2 2146 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 GOLGA8QA0A0J9YX86 632 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 GOLGA8OA6NCC3 632 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 GOLGA8NF8WBI6 632 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 SDHDO14521 159 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 LZTS3O60299 673 aaPredicted RBP18.91■□□□□ 0.62
LMNB1-202ENST00000395354 CDK14O94921 469 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 ENO1P06733 434 aaKnown RBP18.91■□□□□ 0.62
LMNB1-202ENST00000395354 C6P13671 934 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 AOAHP28039 575 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 EPHA3P29320 983 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 AKT1P31749 480 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 SH3BP2P78314 561 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 ELF3P78545 371 aaPredicted RBP18.91■□□□□ 0.62
LMNB1-202ENST00000395354 BTKQ06187 659 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 CDC16Q13042 620 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 PCBP2Q15366 365 aaKnown RBP eCLIP18.91■□□□□ 0.62
LMNB1-202ENST00000395354 PPP1R3AQ16821 1122 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 CDKL4Q5MAI5 379 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 PLEKHS1Q5SXH7 462 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 METTL2BQ6P1Q9 378 aaKnown RBP18.91■□□□□ 0.62
LMNB1-202ENST00000395354 SLC36A4Q6YBV0 504 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 NLRP8Q86W28 1048 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 PDPRQ8NCN5 879 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 NELL1Q92832 810 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 CMTM5Q96DZ9 223 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 DTD2Q96FN9 168 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 TBC1D10AQ9BXI6 508 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.91■□□□□ 0.623e-8■□□□□ 8.3
LMNB1-202ENST00000395354 PCTPQ9UKL6 214 aa18.91■□□□□ 0.62
LMNB1-202ENST00000395354 GON4LQ3T8J9 2241 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 TMEM233B4DJY2 109 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 E9PBE3 544 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 KLHL41O60662 606 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 TM7SF2O76062 418 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 KRT16P08779 473 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 GM2AP17900 193 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 MSH3P20585 1137 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 CDH13P55290 713 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 PPP2CBP62714 309 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 PPP2CAP67775 309 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 RPL6Q02878 288 aaKnown RBP18.9■□□□□ 0.62
LMNB1-202ENST00000395354 SGCGQ13326 291 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 TMEM259Q4ZIN3 620 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 CYB5D1Q6P9G0 228 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 RPS27LQ71UM5 84 aaKnown RBP18.9■□□□□ 0.62
LMNB1-202ENST00000395354 TRIM69Q86WT6 500 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 GLYATL1Q969I3 302 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 AP2M1Q96CW1 435 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 C1QTNF2Q9BXJ5 285 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 C1orf21Q9H246 121 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 ZNF385DQ9H6B1 395 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 TNFRSF12AQ9NP84 129 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 MID1IP1Q9NPA3 183 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 ZSCAN32Q9NX65 697 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 STK38LQ9Y2H1 464 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 COQ6Q9Y2Z9 468 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 DOCK9Q9BZ29 2069 aa18.9■□□□□ 0.62
LMNB1-202ENST00000395354 FADS2P1A8MWK0 482 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 DLL1O00548 723 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 AZIN1O14977 448 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 GYG2O15488 501 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 FFAR2O15552 330 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 NUAK1O60285 661 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 FTH1P02794 183 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 JUNP05412 331 aaKnown RBP18.89■□□□□ 0.62
LMNB1-202ENST00000395354 MPC1LP0DKB6 136 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 BCKDHBP21953 392 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 MAT2AP31153 395 aaKnown RBP18.89■□□□□ 0.62
LMNB1-202ENST00000395354 CCR7P32248 378 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 UGT3A2Q3SY77 523 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 KANK2Q63ZY3 851 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 KIAA0895LQ68EN5 471 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 NEK10Q6ZWH5 1172 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 EFL1Q7Z2Z2 1120 aaKnown RBP18.89■□□□□ 0.62
LMNB1-202ENST00000395354 HOMEZQ8IX15 550 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 TEX9Q8N6V9 391 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 OR56A4Q8NGH8 313 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 AGAP11Q8TF27 550 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 GAB3Q8WWW8 586 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 KLK6Q92876 244 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 SLC17A9Q9BYT1 436 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 TAS2R1Q9NYW7 299 aa18.89■□□□□ 0.62
LMNB1-202ENST00000395354 PLXND1Q9Y4D7 1925 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 LRRK1Q38SD2 2015 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 LRRC14BA6NHZ5 514 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 NCF1BA6NI72 391 aaPredicted RBP18.89■□□□□ 0.61
LMNB1-202ENST00000395354 NCF1CA8MVU1 366 aaPredicted RBP18.89■□□□□ 0.61
LMNB1-202ENST00000395354 C10orf142B7Z368 130 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 HRO43593 1189 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 MGRN1O60291 552 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 RECQL5O94762 991 aaPredicted RBP18.89■□□□□ 0.61
LMNB1-202ENST00000395354 PAK4O96013 591 aaPredicted RBP18.89■□□□□ 0.61
LMNB1-202ENST00000395354 ENO2P09104 434 aaPredicted RBP18.89■□□□□ 0.61
LMNB1-202ENST00000395354 NCF1P14598 390 aaPredicted RBP18.89■□□□□ 0.61
LMNB1-202ENST00000395354 VCLP18206 1134 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 CCR5P51681 352 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 DPTQ07507 201 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 KLF10Q13118 480 aa18.89■□□□□ 0.61
LMNB1-202ENST00000395354 SRSF5Q13243 272 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms