RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 LRCH1Q9Y2L9 728 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 SZT2Q5T011 3432 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 TBC1D3DA0A087WVF3 549 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 TBC1D3IA0A087WXS9 549 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 TBC1D3EA0A087X179 549 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 TBC1D3KA0A087X1G2 549 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 TBC1D3FA6NER0 549 aaPredicted RBP15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 MGAT4DA6NG13 374 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 TBC1D3LB9A6J9 549 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 TBC1D3HP0C7X1 549 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 IDO1P14902 403 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 CR2P20023 1033 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 ACSM2AQ08AH3 577 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 ACSM2BQ68CK6 577 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 TBC1D3GQ6DHY5 549 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 TBC1D3CQ6IPX1 549 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 TBC1D3Q8IZP1 549 aaPredicted RBP15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 ST13P4Q8IZP2 240 aaPredicted RBP15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 TMEM151AQ8N4L1 468 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 RNF217Q8TC41 542 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 ZFRQ96KR1 1074 aaKnown RBP15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 PKP2Q99959 881 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 TMEM79Q9BSE2 394 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 SEZ6LQ9BYH1 1024 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 THG1LQ9NWX6 298 aaKnown RBP15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 HEPACAM2A8MVW5 462 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 CLIC3O95833 236 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 CATP04040 527 aaKnown RBP15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 CAPN3P20807 821 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 ATP6V1C1P21283 382 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 ACRV1P26436 265 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 VRK3Q8IV63 474 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 ZNF786Q8N393 782 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 JADE3Q92613 823 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 PPP2R3CQ969Q6 453 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 SCRN2Q96FV2 425 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 ADNPQ9H2P0 1102 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 ZDHHC3Q9NYG2 299 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 INVSQ9Y283 1065 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 ARID1BQ8NFD5 2236 aaPredicted RBP15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 MYO1DO94832 1006 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 ATP1B2P14415 290 aaPredicted RBP15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 CPOXP36551 454 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 KIAA1324Q6UXG2 1013 aaKnown RBP15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 HTR3DQ70Z44 454 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 OR8D1Q8WZ84 308 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 FAM120BQ96EK7 910 aaKnown RBP15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 PLEKHG4BQ96PX9 1271 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 ING2Q9H160 280 aa15.59■□□□□ 0.09
SMARCD1-202ENST00000394963 TRPM7Q96QT4 1865 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 H0Y858 1186 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 CCR7P32248 378 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 S100A3P33764 101 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 MAGEA12P43365 314 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 NKX3-2P78367 333 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 NFKB2Q00653 900 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 LIPEQ05469 1076 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 C6orf136Q5SQH8 315 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 STK32CQ86UX6 486 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 KBTBD2Q8IY47 623 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 RIN3Q8TB24 985 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 TEX37Q96LM6 180 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 NSMCE2Q96MF7 247 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 ALG2Q9H553 416 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 LRTM1Q9HBL6 345 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 MBD1Q9UIS9 605 aaPredicted RBP15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 MCM8Q9UJA3 840 aa15.58■□□□□ 0.09
SMARCD1-202ENST00000394963 CD72P21854 359 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 CTSCP53634 463 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 FOLH1Q04609 750 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 CCDC85BQ15834 202 aaPredicted RBP15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 IER5LQ5T953 404 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 GALNT10Q86SR1 603 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 OR2A12Q8NGT7 310 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 JPH3Q8WXH2 748 aaPredicted RBP15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 FGF13Q92913 245 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 TPD52L3Q96J77 140 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 ASB2Q96Q27 587 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 CENPKQ9BS16 269 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 FZD3Q9NPG1 666 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 PCTPQ9UKL6 214 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 PCDHGB4Q9UN71 923 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 TMEM202A6NGA9 273 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 ARHGEF15O94989 841 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 ACADSP16219 412 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 FSHRP23945 695 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 RFC2P35250 354 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 PTSQ03393 145 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 CAMK2GQ13555 558 aaPredicted RBP15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 TRIM25Q14258 630 aaKnown RBP15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 SPANXN4Q5MJ08 99 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 TXNDC11Q6PKC3 985 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 PLD3Q8IV08 490 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 SOX17Q9H6I2 414 aaPredicted RBP15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 GPSM3Q9Y4H4 160 aa15.58■□□□□ 0.08
SMARCD1-202ENST00000394963 RECQL5O94762 991 aaPredicted RBP15.57■□□□□ 0.08
SMARCD1-202ENST00000394963 DPP6P42658 865 aa15.57■□□□□ 0.08
SMARCD1-202ENST00000394963 GNPDA1P46926 289 aa15.57■□□□□ 0.08
SMARCD1-202ENST00000394963 SLC20A2Q08357 652 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms