RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ST6GAL1P15907 406 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 ARNTP27540 789 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 PEBP1P30086 187 aaKnown RBP8.6□□□□□ -1.03
ATG4A-205ENST00000394892 CASRP41180 1078 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 GABRA4P48169 554 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 POLE2P56282 527 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 CRADDP78560 199 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 PDE1BQ01064 536 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 CDC20Q12834 499 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 ABRQ12979 859 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 PRKG2Q13237 762 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 TUBB3Q13509 450 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 PLCL1Q15111 1095 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 RPS6KA1Q15418 735 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 DNTTIP2Q5QJE6 756 aaKnown RBP8.6□□□□□ -1.03
ATG4A-205ENST00000394892 FAM69BQ5VUD6 431 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 PACS1Q6VY07 963 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 ZNF517Q6ZMY9 492 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-205ENST00000394892 LURAP1LQ8IV03 231 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 LRRC8AQ8IWT6 810 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 ESX1Q8N693 406 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 PRELID2Q8N945 189 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 SIDT2Q8NBJ9 832 aaKnown RBP8.6□□□□□ -1.03
ATG4A-205ENST00000394892 OR52E1Q8NGJ3 308 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 OR5AR1Q8NGP9 310 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 CT55Q8WUE5 264 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 ZFPM2Q8WW38 1151 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 STARD8Q92502 1023 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 UBXN4Q92575 508 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 PPP1R2P1Q96PQ5 205 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 RANBP9Q96S59 729 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 FERMT1Q9BQL6 677 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 EFHD1Q9BUP0 239 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 PITPNM3Q9BZ71 974 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 KLHL25Q9H0H3 589 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 LZTFL1Q9NQ48 299 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 CHRAC1Q9NRG0 131 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 RAB6BQ9NRW1 208 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 FGF21Q9NSA1 209 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 SPHK1Q9NYA1 384 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 LNPEPQ9UIQ6 1025 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 RIMKLBQ9ULI2 386 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 ICKQ9UPZ9 632 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 ZNF148Q9UQR1 794 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 BTRCQ9Y297 605 aa8.6□□□□□ -1.03
ATG4A-205ENST00000394892 ZFC3H1O60293 1989 aaKnown RBP8.6□□□□□ -1.03
ATG4A-205ENST00000394892 KLHL33A6NCF5 533 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 IQCF5A8MTL0 148 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 PSMD3O43242 534 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 KRT86O43790 486 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 AP2A2O94973 939 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 PDGFAP04085 211 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 PRDX3P30048 256 aaKnown RBP8.59□□□□□ -1.03
ATG4A-205ENST00000394892 CCR7P32248 378 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 CXCR5P32302 372 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 DLSTP36957 453 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 FDFT1P37268 417 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 CD151P48509 253 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 GSDMDP57764 484 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 RPS18P62269 152 aaKnown RBP8.59□□□□□ -1.03
ATG4A-205ENST00000394892 HSD11B2P80365 405 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 FOXK1P85037 733 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 CDH17Q12864 832 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 GPS2Q13227 327 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 GRB7Q14451 532 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 ITIH4Q14624 930 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 BRD3Q15059 726 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 CCNG2Q16589 344 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 DEFB109BQ30KR1 87 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 PLEKHS1Q5SXH7 462 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 SEL1L2Q5TEA6 688 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 C16orf46Q6P387 395 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 TTC27Q6P3X3 843 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 DRICH1Q6PGQ1 229 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-205ENST00000394892 TRIM73Q86UV7 250 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 PPP1R3BQ86XI6 285 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 RASGRP3Q8IV61 690 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 FAM20CQ8IXL6 584 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 ACVR1CQ8NER5 493 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 OR1L3Q8NH93 324 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 C9orf43Q8TAL5 461 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-205ENST00000394892 HEXDCQ8WVB3 486 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 LCN9Q8WX39 176 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 TFGQ92734 400 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-205ENST00000394892 TRAPPC9Q96Q05 1148 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 FERD3LQ96RJ6 166 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 CD180Q99467 661 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 TRIM56Q9BRZ2 755 aaKnown RBP8.59□□□□□ -1.03
ATG4A-205ENST00000394892 HGH1Q9BTY7 390 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 MENTQ9BUN1 341 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 FRMD8P1Q9BZ68 369 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-205ENST00000394892 TSGA10Q9BZW7 698 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 TRIT1Q9H3H1 467 aaKnown RBP8.59□□□□□ -1.03
ATG4A-205ENST00000394892 TFB2MQ9H5Q4 396 aaKnown RBP8.59□□□□□ -1.03
ATG4A-205ENST00000394892 FAM60AQ9NP50 221 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 LHX9Q9NQ69 397 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 TREX1Q9NSU2 369 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 PLAGL1Q9UM63 463 aa8.59□□□□□ -1.03
ATG4A-205ENST00000394892 DRG1Q9Y295 367 aaKnown RBP8.59□□□□□ -1.03
ATG4A-205ENST00000394892 TCAF1Q9Y4C2 921 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms