RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 PORP16435 677 aaPredicted RBP13□□□□□ -0.33
NFKB1-202ENST00000394820 ZNF12P17014 697 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 GKP32189 559 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 RPL34P49207 117 aaKnown RBP13□□□□□ -0.33
NFKB1-202ENST00000394820 TXNL4AP83876 142 aaKnown RBP13□□□□□ -0.33
NFKB1-202ENST00000394820 MOGQ16653 247 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 RAB41Q5JT25 222 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 KCTD11Q693B1 232 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 FBXL22Q6P050 247 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 DEFB128Q7Z7B8 93 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 C2orf73Q8N5S3 287 aaPredicted RBP13□□□□□ -0.33
NFKB1-202ENST00000394820 RTL3Q8N8U3 475 aaKnown RBP13□□□□□ -0.33
NFKB1-202ENST00000394820 STON2Q8WXE9 905 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 CDKN2AIPNLQ96HQ2 116 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 TRMOQ9BU70 441 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 MALT1Q9UDY8 824 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 TBC1D30Q9Y2I9 924 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 FAM32AQ9Y421 112 aaKnown RBP13□□□□□ -0.33
NFKB1-202ENST00000394820 KRT87PA6NCN2 255 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 CXCR6O00574 342 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 SEPT4O43236 478 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 BCAS1O75363 584 aaPredicted RBP13□□□□□ -0.33
NFKB1-202ENST00000394820 OXSR1O95747 527 aaPredicted RBP13□□□□□ -0.33
NFKB1-202ENST00000394820 DNAJB2P25686 324 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 ATP6V1E1P36543 226 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 CD47Q08722 323 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 SCAPQ12770 1279 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 SPANXN2Q5MJ10 180 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 ZNF648Q5T619 568 aaPredicted RBP13□□□□□ -0.33
NFKB1-202ENST00000394820 ATXN7L2Q5T6C5 722 aaPredicted RBP13□□□□□ -0.33
NFKB1-202ENST00000394820 EPHX4Q8IUS5 362 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 FAM217AQ8IXS0 508 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 DTWD1Q8N5C7 304 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 KLHDC9Q8NEP7 349 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 TBC1D15Q8TC07 691 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 RAET1EQ8TD07 263 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 C1QTNF1Q9BXJ1 281 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 CIPCQ9C0C6 399 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 MRGBPQ9NV56 204 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 DUSP12Q9UNI6 340 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 CAB39Q9Y376 341 aaPredicted RBP13□□□□□ -0.33
NFKB1-202ENST00000394820 RGPD3A6NKT7 1758 aaPredicted RBP12.99□□□□□ -0.33
NFKB1-202ENST00000394820 RGPD4Q7Z3J3 1758 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 RFXANKO14593 260 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 ALPIP09923 528 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 PKMP14618 531 aaKnown RBP12.99□□□□□ -0.33
NFKB1-202ENST00000394820 TCEA1P23193 301 aaKnown RBP12.99□□□□□ -0.33
NFKB1-202ENST00000394820 AIF1P55008 147 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 MLLT6P55198 1093 aaPredicted RBP12.99□□□□□ -0.33
NFKB1-202ENST00000394820 CCL23P55773 120 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 ZXDBP98169 803 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 PDCD4Q53EL6 469 aaKnown RBP12.99□□□□□ -0.33
NFKB1-202ENST00000394820 C6orf136Q5SQH8 315 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 PM20D1Q6GTS8 502 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 PDE12Q6L8Q7 609 aaKnown RBP12.99□□□□□ -0.33
NFKB1-202ENST00000394820 DOK6Q6PKX4 331 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 BHLHA9Q7RTU4 235 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 CLEC14AQ86T13 490 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 ACDQ96AP0 544 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 MTERF3Q96E29 417 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 KCNC2Q96PR1 638 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 LRRC3Q9BY71 257 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 GKN1Q9NS71 199 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 FARSBQ9NSD9 589 aaKnown RBP12.99□□□□□ -0.33
NFKB1-202ENST00000394820 TEKT2Q9UIF3 430 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 ZNF510Q9Y2H8 683 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 MTX2O75431 263 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 XPAP23025 273 aaPredicted RBP12.99□□□□□ -0.33
NFKB1-202ENST00000394820 IL12AP29459 219 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 CRATP43155 626 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 RAB25P57735 213 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 TUBA4AP68366 448 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 PFKPQ01813 784 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 FAM180BQ6P0A1 224 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 TPGS1Q6ZTW0 290 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 ZDHHC21Q8IVQ6 265 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 PROX1Q92786 737 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 DEPDC7Q96QD5 511 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 REEP1Q9H902 201 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 CTPS2Q9NRF8 586 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 UBA2Q9UBT2 640 aaPredicted RBP12.99□□□□□ -0.33
NFKB1-202ENST00000394820 RAPGEFL1Q9UHV5 662 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 IKZF3Q9UKT9 509 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 SIP14410 1827 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 H3BN98 237 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 S1PR4O95977 384 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 GBAP04062 536 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 MSH3P20585 1137 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 GPX3P22352 226 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 POLD2P49005 469 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 HCAR3P49019 387 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 CYP4F8P98187 520 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 SF1Q15637 639 aaKnown RBP12.99□□□□□ -0.33
NFKB1-202ENST00000394820 TMEM207Q6UWW9 146 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 RNF180Q86T96 592 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 AKAP14Q86UN6 197 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 MON1AQ86VX9 555 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 CACUL1Q86Y37 369 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 GTPBP3Q969Y2 492 aaKnown RBP12.99□□□□□ -0.33
NFKB1-202ENST00000394820 SEZ6LQ9BYH1 1024 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms