RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 HBQ1P09105 142 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 ABRQ12979 859 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 CPZQ66K79 652 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 DENND5AQ6IQ26 1287 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 ZNF449Q6P9G9 518 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 SARM1Q6SZW1 724 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 LILRA3Q8N6C8 439 aaPredicted RBP16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 ENDOVQ8N8Q3 282 aaKnown RBP16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 GLIS1Q8NBF1 620 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 PPM1MQ96MI6 270 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 SPATA13Q96N96 652 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 DHRS4Q9BTZ2 278 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 HEMGNQ9BXL5 484 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 TLR10Q9BXR5 811 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 CHRNA10Q9GZZ6 450 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 COG4Q9H9E3 785 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 PCMTD2Q9NV79 361 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 ZDHHC3Q9NYG2 299 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 PCDHA13Q9Y5I0 950 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 SPTAN1Q13813 2472 aaKnown RBP16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 RP1L1Q8IWN7 2480 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 CCDC66A2RUB6 948 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 ARGFXA6NJG6 315 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 LDB2O43679 373 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 DPM1O60762 260 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 TMEM63AO94886 807 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 RBP3P10745 1247 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 PSMB4P28070 264 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 PTGIRP43119 386 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 PREPP48147 710 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 CCL11P51671 97 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 VAV2P52735 878 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 RRADP55042 308 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 OTUD4Q01804 1114 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 SPA17Q15506 151 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 CCDC181Q5TID7 509 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 SYTL1Q8IYJ3 562 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 TC2NQ8N9U0 490 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 OR13C4Q8NGS5 318 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 OR1L3Q8NH93 324 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 CLIP3Q96DZ5 547 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 FERD3LQ96RJ6 166 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 C17orf62Q9BQA9 187 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 OSBPL8Q9BZF1 889 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 ACTR5Q9H9F9 607 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 LRRC4CQ9HCJ2 640 aa16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 CUEDC1Q9NWM3 386 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-202ENST00000394082 MED13Q9UHV7 2174 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 TEX15Q9BXT5 2789 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 BLACEA4D250 179 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 C2orf74A8MZ97 194 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 TMEM150CB9EJG8 249 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 ST6GAL1P15907 406 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 CYP2A7P20853 494 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 ACRV1P26436 265 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 ARCN1P48444 511 aaKnown RBP16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 EIF3EP60228 445 aaKnown RBP16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 BOP1Q14137 746 aaKnown RBP16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 NCF4Q15080 339 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 FHL5Q5TD97 284 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 LCN10Q6JVE6 187 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 FAM198BQ6UWH4 519 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 AMIGO1Q86WK6 493 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 IP6K3Q96PC2 410 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 TRAPPC9Q96Q05 1148 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 TBL1YQ9BQ87 522 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 APOL2Q9BQE5 337 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 C10orf88Q9H8K7 445 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 PADI2Q9Y2J8 665 aa16.96■□□□□ 0.31
SNRPA1-202ENST00000394082 SPTBN1Q01082 2364 aaKnown RBP16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 SEC16AO15027 2179 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 TNRC6AQ8NDV7 1962 aaKnown RBP16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 GSAPA4D1B5 854 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 E7EQ34 232 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 QSOX1O00391 747 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 BTN3A3O00478 584 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 BTN3A1O00481 513 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 KCNN4O15554 427 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 AP2A2O94973 939 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 TJP3O95049 919 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 CD63P08962 238 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 PSMA3P25788 255 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 CTNNA2P26232 953 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 CETN2P41208 172 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 ITGA1P56199 1179 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 CHAF1BQ13112 559 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 OLIG2Q13516 323 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 NADK2Q4G0N4 442 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 PRAMEF17Q5VTA0 474 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 ZNF385CQ66K41 422 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 KCTD11Q693B1 232 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 FBXO38Q6PIJ6 1188 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 ADGRF3Q8IZF5 1079 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 OR52E1Q8NGJ3 308 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 TFGQ92734 400 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 SMAD5Q99717 465 aaKnown RBP16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 TSPY26PQ9H489 355 aa16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 NLE1Q9NVX2 485 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-202ENST00000394082 C5AR2Q9P296 337 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms