RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 SPATS2LQ9NUQ6 558 aaKnown RBP13.32□□□□□ -0.28
PTN-202ENST00000393083 DNAAF2Q9NVR5 837 aaKnown RBP13.32□□□□□ -0.28
PTN-202ENST00000393083 KLHL14Q9P2G3 628 aa13.32□□□□□ -0.28
PTN-202ENST00000393083 TSR3Q9UJK0 312 aaKnown RBP13.32□□□□□ -0.28
PTN-202ENST00000393083 IKZF3Q9UKT9 509 aa13.32□□□□□ -0.28
PTN-202ENST00000393083 ADAMTS9Q9P2N4 1935 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 BTN3A1O00481 513 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 TOR1BO14657 336 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 INPP4BO15327 924 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 KERAO60938 352 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 SMIM24O75264 130 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 TGDSO95455 350 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 PCCBP05166 539 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 TRIM23P36406 574 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 GPR1P46091 355 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 RGS4P49798 205 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 DNAJB13P59910 316 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 YPEL5P62699 121 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 ARHGAP8P85298 464 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 DPTQ07507 201 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 TSNQ15631 228 aaKnown RBP13.31□□□□□ -0.28
PTN-202ENST00000393083 TTLL9Q3SXZ7 439 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 KHDC1Q4VXA5 237 aaKnown RBP13.31□□□□□ -0.28
PTN-202ENST00000393083 ZNF648Q5T619 568 aaPredicted RBP13.31□□□□□ -0.28
PTN-202ENST00000393083 STPG1Q5TH74 334 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 PNCKQ6P2M8 343 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 NLRP8Q86W28 1048 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 DCP2Q8IU60 420 aaKnown RBP13.31□□□□□ -0.28
PTN-202ENST00000393083 SLC22A9Q8IVM8 553 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 C10orf82Q8WW14 230 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 ATOH8Q96SQ7 321 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 RNF112Q9ULX5 631 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 ARL2BPQ9Y2Y0 163 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 DMXL1Q9Y485 3027 aa13.31□□□□□ -0.28
PTN-202ENST00000393083 SPTY2D1-AS1A0A0U1RR47 76 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 C4orf47A7E2U8 309 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 SUPT3HB4E1H0 165 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 UBXN8O00124 270 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 CDC7O00311 574 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 SUPT3HO75486 399 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 IPO13O94829 963 aaKnown RBP13.3□□□□□ -0.28
PTN-202ENST00000393083 AP2A2O94973 939 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 HSPA4LO95757 839 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 CER1O95813 267 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 SOD1P00441 154 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 ARRB2P32121 409 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 ATXN3P54252 364 aaPredicted RBP13.3□□□□□ -0.28
PTN-202ENST00000393083 NFKB2Q00653 900 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 RCN2Q14257 317 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 FZD2Q14332 565 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 SHBQ15464 509 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 PRAMEF14Q5SWL7 426 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 PIWIL4Q7Z3Z4 852 aaKnown RBP13.3□□□□□ -0.28
PTN-202ENST00000393083 MYO1HQ8N1T3 1032 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 RFWD2Q8NHY2 731 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 STAG3L4Q8TBR4 150 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 NETO1Q8TDF5 533 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 TMEM237Q96Q45 408 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 SORT1Q99523 831 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 ELF4Q99607 663 aaPredicted RBP13.3□□□□□ -0.28
PTN-202ENST00000393083 APOOQ9BUR5 198 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 ACSS2Q9NR19 701 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 NCKIPSDQ9NZQ3 722 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 MARCOQ9UEW3 520 aaPredicted RBP13.3□□□□□ -0.28
PTN-202ENST00000393083 DNAJC16Q9Y2G8 782 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 OR1A2Q9Y585 309 aa13.3□□□□□ -0.28
PTN-202ENST00000393083 ZFC3H1O60293 1989 aaKnown RBP13.3□□□□□ -0.28
PTN-202ENST00000393083 A0A1B0GTQ1 180 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 SYCE1LA8MT33 242 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 QSOX1O00391 747 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 HOXC4P09017 264 aaPredicted RBP13.29□□□□□ -0.28
PTN-202ENST00000393083 ZNF883P0CG24 379 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 TPBGLP0DKB5 382 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 KITP10721 976 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 DGKAP23743 735 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 TEAD1P28347 426 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 RXRGP48443 463 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 KCNC1P48547 511 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 NAGLUP54802 743 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 ACSBG2Q5FVE4 666 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 CCNYL1Q8N7R7 359 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 FUBP1Q96AE4 644 aaKnown RBP13.29□□□□□ -0.28
PTN-202ENST00000393083 PHF21BQ96EK2 531 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 PDLIM5Q96HC4 596 aaKnown RBP13.29□□□□□ -0.28
PTN-202ENST00000393083 DRC3Q9H069 523 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 CAAP1Q9H8G2 361 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 LATS2Q9NRM7 1088 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 DCTN4Q9UJW0 460 aa13.29□□□□□ -0.28
PTN-202ENST00000393083 PNMA8BQ9ULN7 279 aaPredicted RBP13.29□□□□□ -0.28
PTN-202ENST00000393083 CCDC189A1A4V9 331 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 OR2AG2A6NM03 316 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 TM4SF5O14894 197 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 DFNA5O60443 496 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 NPHS1O60500 1241 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 FTH1P02794 183 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 GFAPP14136 432 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 CCR7P32248 378 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 EIF2B5Q13144 721 aaKnown RBP13.28□□□□□ -0.28
PTN-202ENST00000393083 CFAP157Q5JU67 520 aa13.28□□□□□ -0.28
PTN-202ENST00000393083 ATG14Q6ZNE5 492 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms