RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 PREPP48147 710 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 LEPRP48357 1165 aaKnown RBP12.34□□□□□ -0.43
GGPS1-203ENST00000391855 ATP1A2P50993 1020 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 TERF1P54274 439 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 ADARP55265 1226 aaKnown RBP12.34□□□□□ -0.43
GGPS1-203ENST00000391855 DHX34Q14147 1143 aaKnown RBP12.34□□□□□ -0.43
GGPS1-203ENST00000391855 DNAJC21Q5F1R6 531 aaKnown RBP12.34□□□□□ -0.43
GGPS1-203ENST00000391855 DNTTIP2Q5QJE6 756 aaKnown RBP12.34□□□□□ -0.43
GGPS1-203ENST00000391855 CACHD1Q5VU97 1274 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 MICALCLQ6ZW33 695 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 TMEM135Q86UB9 458 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 DTX1Q86Y01 620 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 TBC1D21Q8IYX1 336 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 GABPB2Q8TAK5 448 aaPredicted RBP12.34□□□□□ -0.43
GGPS1-203ENST00000391855 LCN9Q8WX39 176 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 KLHL6Q8WZ60 621 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 ZNF669Q96BR6 464 aaPredicted RBP12.34□□□□□ -0.43
GGPS1-203ENST00000391855 NAT9Q9BTE0 207 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 P2RY12Q9H244 342 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 TRIT1Q9H3H1 467 aaKnown RBP12.34□□□□□ -0.43
GGPS1-203ENST00000391855 PRORYQ9H606 182 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 HRASLS2Q9NWW9 162 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 FOXJ2Q9P0K8 574 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 ASF1AQ9Y294 204 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 MRFAP1Q9Y605 127 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 RPS6KL1Q9Y6S9 549 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 PKD1L2Q7Z442 2459 aa12.33□□□□□ -0.43
GGPS1-203ENST00000391855 FREM2Q5SZK8 3169 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 UBA6A0AVT1 1052 aaPredicted RBP12.33□□□□□ -0.44
GGPS1-203ENST00000391855 GOLGA8MH3BSY2 632 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 AGRPO00253 132 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 POLR1CO15160 346 aaPredicted RBP12.33□□□□□ -0.44
GGPS1-203ENST00000391855 AVILO75366 819 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 USP1O94782 785 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 ESR1P03372 595 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 SHMT2P34897 504 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 PTGIRP43119 386 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 ARCN1P48444 511 aaKnown RBP12.33□□□□□ -0.44
GGPS1-203ENST00000391855 DR1Q01658 176 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 IL11RAQ14626 422 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 ANKRD20A4Q4UJ75 823 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 IZUMO3Q5VZ72 239 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 ANKS6Q68DC2 871 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 NEPROQ6NW34 567 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 FAM92BQ6ZTR7 304 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 GPR155Q7Z3F1 870 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 LDB1Q86U70 411 aaPredicted RBP12.33□□□□□ -0.44
GGPS1-203ENST00000391855 BPHLQ86WA6 291 aaPredicted RBP12.33□□□□□ -0.44
GGPS1-203ENST00000391855 SLC22A15Q8IZD6 547 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 OR52E1Q8NGJ3 308 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 GSDMBQ8TAX9 411 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 CALML6Q8TD86 181 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 SLC41A2Q96JW4 573 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 FCRL3Q96P31 734 aaPredicted RBP12.33□□□□□ -0.44
GGPS1-203ENST00000391855 CCNL2Q96S94 520 aaPredicted RBP12.33□□□□□ -0.44
GGPS1-203ENST00000391855 SRMSQ9H3Y6 488 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 INTS10Q9NVR2 710 aaKnown RBP12.33□□□□□ -0.44
GGPS1-203ENST00000391855 B3GALT1Q9Y5Z6 326 aa12.33□□□□□ -0.44
GGPS1-203ENST00000391855 TEX51A0A1B0GUA7 166 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 OR6C74A6NCV1 312 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 GPC4O75487 556 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 TTC4O95801 387 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 NELFEP18615 380 aaKnown RBP12.32□□□□□ -0.44
GGPS1-203ENST00000391855 AOAHP28039 575 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 ACADLP28330 430 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 CCR7P32248 378 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 ARL4DP49703 201 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 SEPHS1P49903 392 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 EIF3BP55884 814 aaKnown RBP12.32□□□□□ -0.44
GGPS1-203ENST00000391855 ETF1P62495 437 aaKnown RBP12.32□□□□□ -0.44
GGPS1-203ENST00000391855 ACY1Q03154 408 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 HSPA14Q0VDF9 509 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 THOC5Q13769 683 aaKnown RBP12.32□□□□□ -0.44
GGPS1-203ENST00000391855 MAP7Q14244 749 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 MORF4L2Q15014 288 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 MANEAQ5SRI9 462 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 CES3Q6UWW8 571 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 UNC5DQ6UXZ4 953 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 AMIGO1Q86WK6 493 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 ZFAND4Q86XD8 727 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 KLHL7Q8IXQ5 586 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 ASPMQ8IZT6 3477 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 OR5K2Q8NHB8 316 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 SNRNP27Q8WVK2 155 aaKnown RBP12.32□□□□□ -0.44
GGPS1-203ENST00000391855 JPH3Q8WXH2 748 aaPredicted RBP12.32□□□□□ -0.44
GGPS1-203ENST00000391855 LPGAT1Q92604 370 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 STAMBPL1Q96FJ0 436 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 SIGLEC10Q96LC7 697 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 HGH1Q9BTY7 390 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 POMT2Q9UKY4 750 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 MAD1L1Q9Y6D9 718 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 BPTFQ12830 3046 aa12.32□□□□□ -0.44
GGPS1-203ENST00000391855 ZCWPW2A0A1B0GU75 182 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 C2orf74A8MZ97 194 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 BHMG1C9JSJ3 638 aaPredicted RBP12.31□□□□□ -0.44
GGPS1-203ENST00000391855 ZBTB11O95625 1053 aaPredicted RBP12.31□□□□□ -0.44
GGPS1-203ENST00000391855 FGF5P12034 268 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 PGAM1P18669 254 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 CASQ1P31415 396 aa12.31□□□□□ -0.44
GGPS1-203ENST00000391855 CXADRP78310 365 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms